Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq17992 201 3e-47 >seq17992 Length=41254 Score = 201 bits (222), Expect = 3e-47 Identities = 683/1047 (65%), Gaps = 23/1047 (2%) Strand=Plus/Plus Query 9409 TATTTCACTGGCGCAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAG 9468 |||||| |||||| |||| |||||||| |||||| | | || ||| |||||| ||| Sbjct 40132 TATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAAC 40191 Query 9469 CCGTGGTGCCTGCGTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGA 9528 || || ||||| || || | | || | | ||||||| || || || || Sbjct 40192 AGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCC 40251 Query 9529 TGCTGGGCAAGAAGACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATA-GCCCGC 9587 |||| |||||||| ||||||||| ||| |||||||||| ||||| || ||| | || Sbjct 40252 TGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGA-ATATGGACGG 40310 Query 9588 TCGCGAAAATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCA 9647 | ||| ||||| |||||| | ||||| ||||| ||||| || ||| | | |||| Sbjct 40311 GCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCA 40370 Query 9648 GTGAATGTCTCGGTGTGGCGCGCTCGCAATTAACGGTTCGACTCAAACAATCGGTATCGC 9707 | |||||| | ||| |||| |||| || || |||| || | | | || | Sbjct 40371 GCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCG-ATGAC 40429 Query 9708 CCAAAATACGGCGGC-GCAGGC----CGATGAACGATACGGAGCT-CGTCGCTGAAATCC 9761 | | ||| || |||| | | ||| |||||||| | | || | | | | | Sbjct 40430 TGGATGGATGGCCGCCGCAGTCGTCACACTGAT-GATACGGATGTGCTTCTCCGTA-TAC 40487 Query 9762 AGCAACAAGTCAGCGAACTGCCCAGCTACGGTTACCGCCGTGTTTGGGGATTGCTGCGCC 9821 | || || | || ||||| | || ||||| || || || |||| |||| ||| Sbjct 40488 ACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCA 40547 Query 9822 GCGCGCGCGAAAAGCAGTCGCTGCCCGCGATCAACGTAAAACGGGTTTACCGAGTCATGC 9881 | | ||| | |||| |||||||| | ||||| |||||||| |||||| Sbjct 40548 GACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGC 40607 Query 9882 GTGATCACAACCTGCTGCTTGAGCGGCG-CATCAAGCAGC-CCGGCGTACCGCGCCGGCA 9939 | | | ||| |||||||||| | | | | | || || | || || || Sbjct 40608 GCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCA--CA 40665 Query 9940 TGAAGGCCGTATCGCCGTTAACACCAGCGACACGCGCTGGTGCTCGGATGGCTTCGAATT 9999 | |||| | | ||||| || ||| | ||| |||||||| || || ||||| || Sbjct 40666 TACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTT 40725 Query 10000 CCGCTGCGACGACGGTGCGAAACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGA 10059 | |||| || |||| | || |||| | || || || || ||||||||||||||||| || Sbjct 40726 CTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGA 40785 Query 10060 AGCCATCGGCTGGGTGGCCAGCCCGACCGGCTACAGCGGCGATGACA-TACGCGACTTGA 10118 || | ||||| || || | ||||| || | | || ||| ||| ||| | | Sbjct 40786 GGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGA-AACAGTACAGGACGTCA 40844 Query 10119 TGCTGGAAAGCGTGGAGAAGCGTTTTGGCGACCTACTGCCGACCACACCGGTGCAATGGC 10178 |||||| | ||||| || || ||| || || ||| | | || ||| | |||| Sbjct 40845 TGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGC 40904 Query 10179 TAAGCGATAACGGTTCGGCCTACATCGCTGAACAGACGCGCCTGTTTGCTCGACAGATTG 10238 | | ||||| ||||| |||| ||| | | || |||| ||| || || | | | Sbjct 40905 TGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGG 40964 Query 10239 GCCTACAGCCAGTGACCACGCCGGTACGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCT 10298 | || | || || |||| |||| || || ||| |||| ||||| || |||||||||| Sbjct 40965 GACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCT 41024 Query 10299 TCGTTAAGACAATCAAGCGCGACTACGTGGCGCACATGCCCAAGCCGGATCG---AGAGA 10355 |||| || || || ||||| |||||| | ||||||||| || || | | | Sbjct 41025 TCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGG 41084 Query 10356 CAGCCTTGCGCAACCTGACGATTGCCTTCGAGCATTACAACGAGCAGCATCCGCACAGCG 10415 |||| | ||||| | || ||||||||||| ||||| ||||||||| || | Sbjct 41085 CAGCAAAG---AACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTG 41141 Query 10416 CCTTGAAATACCGCTCGCCGAGGGAAT 10442 | || || |||||||| |||||| Sbjct 41142 CGCTGGGTTATCGCTCGCCACGGGAAT 41168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121517138312010