Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq94137 131 2e-25 seq3 98.7 1e-15 seq198782 86.0 9e-12 >seq94137 Length=18398 Score = 131 bits (144), Expect = 2e-25 Identities = 178/247 (72%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 201841 AAAAG-CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTA 201899 ||||| ||||||| ||||| || || || || || | ||||| | |||||||| || | Sbjct 9010 AAAAGACCGACCGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAGATGCGGTTCA 8951 Query 201900 ACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCC 201959 | | | ||||| |||||| | || ||||| ||| |||| || || ||| ||| Sbjct 8950 ATCTGGCATCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCGATCGTCC 8891 Query 201960 ATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACG 202019 | || ||||||||||| || |||||||||||||||| | || |||| |||||| || Sbjct 8890 ACGAACTGCTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGACAACGGCG 8831 Query 202020 TCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGC 202079 | ||| |||||||| ||||| || | ||||| | | |||||||| || || || Sbjct 8830 TTCGCATTTGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTCTATGGCTCGC 8771 Query 202080 AATGGCG 202086 | ||||| Sbjct 8770 AGTGGCG 8764 >seq3 Length=194057 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 614 GGGGAGTAGTTCAACTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGCAGGTTCGAGTC 673 |||| |||| ||| ||||||||| ||||||||||||||||| || ||||||||||||| Sbjct 63612 GGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGTC 63671 Query 674 CTGTCTCCCCTGCCAAATTTAGCC 697 ||| | ||||||||| |||| ||| Sbjct 63672 CTGCCGCCCCTGCCAGATTTGGCC 63695 >seq198782 Length=10364 Score = 86.0 bits (94), Expect = 9e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 4030 CTCGTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 || |||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 2510 CTTGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 2451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 687003894102200