Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq94137 114 2e-20 >seq94137 Length=18398 Score = 114 bits (126), Expect = 2e-20 Identities = 175/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 200041 ATGAACCAGTATCTCATCCTCCTAAATCAAGTCCGTCGCGACGGGCATGTAAAGAAAGAC 200100 ||||||||||||| | ||| || | | ||| ||||||| | ||||| ||| Sbjct 9059 ATGAACCAGTATCACGACCTGCTCGAACGCATCCTCAGCGACGGCGCGGAAAAGACCGAC 9000 Query 200101 CGTACCGGTANNNNNACCACGTCTATTTTCGGTGCACAGATGCGCTTCAATCTACAAGAC 200160 || ||||| | || ||| || ||||| |||||||| |||||||| | Sbjct 8999 CGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAGATGCGGTTCAATCTGGCATCG 8940 Query 200161 GGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCACGAGCTGTTG 200220 || ||||| || |||| ||||||||| ||||| || ||| | ||||| ||| || Sbjct 8939 GGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCGATCGTCCACGAACTGCTG 8880 Query 200221 TGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGATAACAATGTCACCATTTGG 200280 ||||| || ||||||||||| ||||| || |||||||| ||| || ||||||| Sbjct 8879 TGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGACAACGGCGTTCGCATTTGG 8820 Query 200281 GACGAATGGGC 200291 ||||| ||||| Sbjct 8819 GACGAGTGGGC 8809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 682955818560000