Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq94137 163 4e-35 seq6710082 98.7 1e-15 >seq94137 Length=18398 Score = 163 bits (180), Expect = 4e-35 Identities = 186/247 (75%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130 ||||| |||||||| || || | || || ||||| |||||||||| || | ||| || Sbjct 9002 GACCGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAGATGCGGTTCAATCTG-GC 8944 Query 196131 AAAGGGTT-CCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACT 196189 | ||||| ||||||| | || ||||| ||| | || ||| || ||| |||||||||| Sbjct 8943 ATCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCGATCGTCCACGAACT 8884 Query 196190 GTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 196249 | ||||||| ||| || |||||||||||| | || ||||| |||||| ||| | || Sbjct 8883 GCTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGACAACGGCGTTCGCAT 8824 Query 196250 CTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309 ||||| |||||||| || || | ||| |||| ||||| ||||| || ||||||||| Sbjct 8823 TTGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTCTATGGCTCGCAGTGGCG 8764 Query 196310 TGCATGG 196316 ||||| Sbjct 8763 GTCATGG 8757 >seq6710082 Length=265 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 5487 CTCTGTAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCGAGTCC 5546 |||||||||||||| |||||||||| ||||||||||||| |||||| | ||||||||||| Sbjct 101 CTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCC 160 Query 5547 TGCCAGAGTCGCCACATTT 5565 | ||||| |||| |||| Sbjct 161 AGTCAGAGGAGCCAGATTT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671576011436200