Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq2123531 279 3e-70 seq115308 271 4e-68 >seq2123531 Length=876 Score = 279 bits (308), Expect = 3e-70 Identities = 285/371 (77%), Gaps = 6/371 (2%) Strand=Plus/Minus Query 61676 CGGATCAGGGCGCGCTCGAACTCAGCGAAGGCCCCCATCACCGACAGCATCAGGTTGGCC 61735 |||||||| ||||||||||||||||| || || ||||| ||||| |||||||| |||||| Sbjct 876 CGGATCAGAGCGCGCTCGAACTCAGCAAACGCACCCATGACCGAGAGCATCAGATTGGCC 817 Query 61736 ATCGGCGAGTCCTCGCCAGTGAACACCAGGCCCTCCTTCAGGAACTCGATGCGCACGCCG 61795 ||||| |||||||| || | ||| ||||| |||||| |||||||| || | || Sbjct 816 ATCGGGGAGTCCTCCCCCGAGAAGGACAGGCTTTCCTTCTCAAACTCGATCCGGATACCT 757 Query 61796 CGCTGAGTCAGCTTCTGTACCAAGCGACGCAGGTCATCGAGGTTGCGGGCCAGCCGATCC 61855 |||| || || ||| |||| ||||||||||| || |||||||||| ||||||| Sbjct 756 CGCTTGGTGAGGCCCTGGACCAGCTTGCGCAGGTCATCCAGATTGCGGGCCAACCGATCC 697 Query 61856 ATGCTATGCACCACCACTGTATCGCCTTCGCGGACGAAGCTCAGCAGCGCTTCGAGCTGG 61915 ||||| || || || || ||||||||||||||| |||| | ||||| || || |||||| Sbjct 696 ATGCTGTGGACGACGACGGTATCGCCTTCGCGGGCGAAAGTGAGCAGAGCCTCAAGCTGG 637 Query 61916 GGGCGCTGGGTGTCCTTGCCCGATGCCTTGTCGGTGAA---CACCTTGCTCACCTGGGTT 61972 ||||| | | ||||||||||||||||||||||||||| | | | | ||| Sbjct 636 GGGCGGTTGACGTCCTTGCCCGATGCCTTGTCGGTGAAGGTCCGATCGAGCGACTG---A 580 Query 61973 TGTTCCAGCTGGCGTTCCGGGTTCTGGTCAAAGCTGCTGACCCGGACGTAGCCGATGCGG 62032 ||||| ||||| ||| ||||| || || ||||||||||||| |||||||| || Sbjct 579 CCTTCCAATTGGCGATCCACATTCTGATCGAACGTGCTGACCCGGACATAGCCGATCCGT 520 Query 62033 TGCCCCTGCAC 62043 ||||||| ||| Sbjct 519 TGCCCCTTCAC 509 >seq115308 Length=15957 Score = 271 bits (300), Expect = 4e-68 Identities = 668/988 (68%), Gaps = 40/988 (4%) Strand=Plus/Minus Query 58583 TAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAGCGGCG--ACAGGAATTGC-AGCAGC 58639 || |||||||| ||| |||||||||||| |||||||||| ||| | || || || Sbjct 8644 TAGTCGCCGGTGAGGCCGATGTGCTCCCATCCCAGCGGCGCGACATGG---GCGAGTAGT 8588 Query 58640 TCGCCGTCCACCGGCTTGCCGGCCTCGACCAACCCCTGGGTGGCGCGTTCCAGGTACACC 58699 ||| || |||| ||| || || | || ||||| || || || ||| Sbjct 8587 TCGTCGGGCACCTCGACACCGCTGGCGCGCAGATGCCGGACCGCGCGGTCGAGATAGACC 8528 Query 58700 GTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCGCTGGCCCGGTAGCGCTGC 58759 |||||||| || || ||||| || | ||| | || ||| ||| || | |||||| Sbjct 8527 GTGTTCCAGAGGGTGACGGCCGCGGTGAGAAGGGTCAGCCCGGAGGCACGATGGCGCTGG 8468 Query 58760 TGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAGAACACCGCCCTGGCCAGC 58819 | |||||| | || || | | ||| || ||||||||||| || | || | ||| ||| Sbjct 8467 TTCTCGAATGTGCGGTCGCGCAATTCGCCGAGGCGGTTGAAAAAGATGGCGCGGGCGAGC 8408 Query 58820 GAGTTGCGCGCCTCACCTTTGTTCAGGCCGGCATGC--ACGCGGCGGCGCAGTTCAACAC 58877 | ||||| || ||||| ||||| ||| | ||| ||| || ||| |||| | Sbjct 8407 GCATTGCGGGCTTCACCCTTGTTGAGGATG--CTGCCGGTGCGACGCCGCTGTTCGGGAT 8350 Query 58878 TTTGCAGCCAGTCCAGGATGAACAGCGTGCGCTCGATCCGGCCCAGCTCGCGCA--GGGC 58935 | | | |||||| || |||||||| |||||||||||||| || |||||||||| | || Sbjct 8349 TGTTGAACCAGTCGAGCATGAACAGGGTGCGCTCGATCCGCCCGAGCTCGCGCAATGCGC 8290 Query 58936 CA-CGGCCAGTCCGTTCTGGCGCGG-GTAGCTGCCGAGCTTGCGCAGCATCAGCGAGGCG 58993 | || || | ||| || ||||| | ||||| |||||||||||||| | ||| ||| Sbjct 8289 GAGCGACCGG---GTTTTGACGCGGAAAACCTGCC-AGCTTGCGCAGCATGACCGACGCG 8234 Query 58994 GTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCAGGATGTCGTCCCAGT-GGGCACG 59052 ||||||||||| | ||||||| ||| || ||||| | |||||||| | | | || Sbjct 8233 CTGACGGTGCCCGCCCGGATCGAGGCGGCGAGCCGCAGCGTCTCGTCCCAATCCGCCTCG 8174 Query 59053 CACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGGGCGCAACGTCGGGTA-GGCTTGCA 59111 || || || ||| | | || | | | |||||||||| || || | || | | Sbjct 8173 ATCGCGC-GGACGTTGACCGGGCGGGCTACGAGCGGGCGCAGTGTGGGCCAGGGGTCGAG 8115 Query 59112 CGCCCTGCGGCACGTACAGCTTGGTTTCGCCGAGGTCGCGGATGCGCGGCGCGAAGCGGA 59171 || | ||| ||| ||| | ||| |||||| ||||| ||||| |||||||||| Sbjct 8114 CGACGACAGGC-TGTAGAGCCGGCGCTCGTTGAGGTCACGGATACGCGGTGCGAAGCGGA 8056 Query 59172 AGCCTAGCAGGT-GCATCAGGGCAAAGACGTGATCGGTGAAGCCGGCCGTGTCGGTGTAG 59230 |||| ||||||| |||| ||| | || ||||||||| ||||| ||||||||| Sbjct 8055 AGCCGAGCAGGTGGCAT-AGGCCGAAAACGTGATCGACCGCCCCGGCGGTGTCGGTGGCA 7997 Query 59231 TGCTCCTCGATCCGCAGGTCGGACTCGTGGTACAGCAGGCCGTCGAGCACATAGGTGGAA 59290 || || ||| ||| ||| ||| |||| |||||||| ||||| || | | || Sbjct 7996 TGTTCGCGGATTACCAGCTCGCTCTCATGGTCGAGCAGGCCATCGAGGACGTGCGCGGCC 7937 Query 59291 TCGCGGAC---GCCGACATTCACCACGCGGGTGCTGAACGGCGCGTACTGGTCGGAGATA 59347 |||| | | | | || | ||| |||| |||||||| | | |||||| || Sbjct 7936 TCGCCGGCATTGGCTGCAATGACC---TTGGTGTGGAACGGCGTGAAGCGGTCGGTGACG 7880 Query 59348 TGGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCGGG--TTGACGTGCCCGGTGC 59405 ||||| ||||||||| || || ||| | ||||| |||| ||| | || | Sbjct 7879 TGGGTGTAGAACAGCACGCCGGGATCGGTGCCGTA--GCGGGCATTGCGATCGGCGCGAC 7822 Query 59406 TCTCGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGTGCCGTCGC 59465 ||||||| | || || ||||||||| ||| ||||| || || || || ||| | Sbjct 7821 CCTCGCCCTGACCGCCGGCGCGGAAGAACTGTCCATCCGACGACGACGTGTCGCCCGGTC 7762 Query 59466 CCCAG---TGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAAGGCCG 59522 ||||| |||||| | ||| ||| || ||| || || | | | |||| |||| Sbjct 7761 CCCAGACCTGGGCG--AGAGGATGCGCGGTA-TGGCAGTCAACGATCGCCGCCAGCGCCG 7705 Query 59523 CCGAATAGGTTTCGTCGCGGATGTGCCA 59550 | ||||||||||||||| | ||||| Sbjct 7704 ACAGATAGGTTTCGTCGCGCACATGCCA 7677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 289547750178370