Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq6835970 302 4e-77 seq256579 96.9 3e-15 seq172890 82.4 7e-11 >seq6835970 Length=262 Score = 302 bits (334), Expect = 4e-77 Identities = 225/261 (86%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 8357 CCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCA 8416 ||||||||||||| ||||||| |||| ||||||||||| |||||||||| ||||||| Sbjct 1 CCCAGGCTGGAGTACAGTGGCACAATCTGGGCTCACTGCAAGCTCCGCCTCCTGGGTTCA 60 Query 8417 AGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCC 8476 || |||||||||||||||||||| ||||||||||| ||||||| ||||||||||| Sbjct 61 TGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACCACGCC 120 Query 8477 AAGCTAA-TTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCT 8535 |||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct 121 CAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCT 180 Query 8536 CGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG 8595 | | ||||||||||| ||||||| || ||| ||||||| ||||||||||||||||||| Sbjct 181 CAATCTCCTGACCTC--GTGATCCGCCCACCTTGGCCTCCTAAAGTGCTGGGATTACAGG 238 Query 8596 CATGAGCCACCGCGCCTGGCC 8616 |||||||||| ||| |||| Sbjct 239 TGTGAGCCACCGTGCCCGGCC 259 >seq256579 Length=8500 Score = 96.9 bits (106), Expect = 3e-15 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| |||||||||||||| || || ||||| || ||| | ||||||||||| ||||| Sbjct 855 ACAAGCAAAATCACAATGAAGACCCTCATCTCTTGAAATAAGCTCATTAGAAAAAGTTAA 796 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 ||||||||||| || ||||| || | ||||||||| ||| |||| Sbjct 795 ACCTGGCATTAAGCCCCGTTTCTTCAACCAAAATATGGCA-CAAA 752 >seq172890 Length=11621 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/194 (74%), Gaps = 18/194 (9%) Strand=Plus/Plus Query 12429 TACATGTTTAAATCTCTCTTAAAA-ATATAATAATTATAATTCATTTT-TTATAACTACT 12486 |||||| |||| || | || || |||| || ||||| ||| | || |||||| || | Sbjct 5755 TACATGCTTAATTCAATTTTTAATTATATTATTATTATTATTATTATTATTATAATTA-T 5813 Query 12487 TATTGATTATATGTAATaaaaaaaTTAATTTATAATTGTAAAAGA------TTTATTATC 12540 |||| |||||||||||| | ||||||||| ||||| | ||| ||| |||||||| Sbjct 5814 TATT-ATTATATGTAAT-ATAAAATTAATATATAACT-TAATAGACTATATTTTATTAT- 5869 Query 12541 GATATATTTAATACGATCAATAAAACAT-GAATATTTTTTATAAATTTTATCAT-CATCA 12598 | |||| |||||| || |||| || || ||||||| ||||| ||||| | || | Sbjct 5870 GTTATAATTAATA--ATTAATATAATATATAATATTTATTATATTATTTATGTTATATTA 5927 Query 12599 TATGATTTATATTT 12612 ||| | |||||||| Sbjct 5928 TATTA-TTATATTT 5940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454648263773000