Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_000866.4 Length=168903 Score E Sequences producing significant alignments: (Bits) Value seq2065080 181 1e-40 >seq2065080 Length=53610 Score = 181 bits (200), Expect = 1e-40 Identities = 282/402 (70%), Gaps = 6/402 (1%) Strand=Plus/Plus Query 141670 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 141729 ||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 141730 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 141789 ||| ||||| | | ||| || ||||| |||||||||||||||||| | ||||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 141790 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAA 141849 || || | || |||||| || || || |||||||| ||||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 141850 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACG 141906 ||| ||| ||||||||| | |||| || || | ||| || | || ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACG 24638 Query 141907 AATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGC 141966 ||| || || ||||| |||||||| || | || ||| | ||||| || |||||| Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698 Query 141967 AGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACTAAA 142026 || | ||| ||||| | || ||| | ||||| | |||||| || ||||| Sbjct 24699 AGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758 Query 142027 CTGTCGAGTCGGAGTACGACAACCAGCCATAATAGGAGTTGG 142068 || | ||| ||||| | ||| |||||||| || ||||| Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGG 24800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519872965884560