Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1859312 95.1 1e-14
seq1835634 86.0 5e-12
>seq1859312
Length=199636
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/234 (69%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 25014 TTTATAAGTAATAG-TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072
||||||| | ||| | | |||||||| |||||||| || || ||||| || || |||||
Sbjct 29249 TTTATAAATTTTAGATTTTAAAATGCAGATATTCATGAAGACGTTGACCGGAAAGACCAT 29308
Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132
|| || || | | || ||| | | || ||||| || ||| || ||
Sbjct 29309 AACTCTTGAGGTTGAGAGCTCTGATACGATTGATAATGTCAAGGCTAAGATTAAAGACAA 29368
Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192
|||||| | || |||||||| || || || ||||||||||| || ||||| |||
Sbjct 29369 GGAAGGTATTCCTCCTGATCAACAGAGGCTCATTTTTGCGGGCAAGCAGTTGGACGATGG 29428
Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||| | | |||||| || ||||| ||||||||||| |||||| | || ||
Sbjct 29429 TCGAACCCTTGTCGATTATAAAATTCAGAAGGAATCTACCCTTCACCTTGTCTT 29482
>seq1835634
Length=113921
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/234 (68%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 25014 TTTATAAGTAATAG-TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072
||||||| | ||| | | |||||||| |||||| | || |||||||| | || |||||
Sbjct 54297 TTTATAAATTTTAGATTTTAAAATGCAGATATTCGTGAAGACATTGACCAGAAATACCAT 54356
Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132
|| || || | | | | | | | | ||||| || ||| || ||
Sbjct 54357 AACTCTTGAGGTTGAGATCTCTTATATGATTGATAACGTCAAGGCTAAGATTCAAGACAA 54416
Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192
|||||| | || ||||||||||| || || |||| ||| ||||| ||||| |||
Sbjct 54417 GGAAGGTATTCCTCCTGATCAACAAAGGCTCATTTTTGTGGGAAAACAGTTGGAGGATGG 54476
Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
| ||| | |||||||| || ||||| ||||||||||| |||||| | || ||
Sbjct 54477 CTGAACCTTCGCCGATTATAACATTCATAAGGAATCTACCCTTCACCTTGTCTT 54530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395610212541308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |