Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1859312 95.1 1e-14 seq1835634 86.0 5e-12 >seq1859312 Length=199636 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 25014 TTTATAAGTAATAG-TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072 ||||||| | ||| | | |||||||| |||||||| || || ||||| || || ||||| Sbjct 29249 TTTATAAATTTTAGATTTTAAAATGCAGATATTCATGAAGACGTTGACCGGAAAGACCAT 29308 Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132 || || || | | || ||| | | || ||||| || ||| || || Sbjct 29309 AACTCTTGAGGTTGAGAGCTCTGATACGATTGATAATGTCAAGGCTAAGATTAAAGACAA 29368 Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192 |||||| | || |||||||| || || || ||||||||||| || ||||| ||| Sbjct 29369 GGAAGGTATTCCTCCTGATCAACAGAGGCTCATTTTTGCGGGCAAGCAGTTGGACGATGG 29428 Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||| | | |||||| || ||||| ||||||||||| |||||| | || || Sbjct 29429 TCGAACCCTTGTCGATTATAAAATTCAGAAGGAATCTACCCTTCACCTTGTCTT 29482 >seq1835634 Length=113921 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/234 (68%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 25014 TTTATAAGTAATAG-TGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCAT 25072 ||||||| | ||| | | |||||||| |||||| | || |||||||| | || ||||| Sbjct 54297 TTTATAAATTTTAGATTTTAAAATGCAGATATTCGTGAAGACATTGACCAGAAATACCAT 54356 Query 25073 TACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAA 25132 || || || | | | | | | | | ||||| || ||| || || Sbjct 54357 AACTCTTGAGGTTGAGATCTCTTATATGATTGATAACGTCAAGGCTAAGATTCAAGACAA 54416 Query 25133 AGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC 25192 |||||| | || ||||||||||| || || |||| ||| ||||| ||||| ||| Sbjct 54417 GGAAGGTATTCCTCCTGATCAACAAAGGCTCATTTTTGTGGGAAAACAGTTGGAGGATGG 54476 Query 25193 CAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 | ||| | |||||||| || ||||| ||||||||||| |||||| | || || Sbjct 54477 CTGAACCTTCGCCGATTATAACATTCATAAGGAATCTACCCTTCACCTTGTCTT 54530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395610212541308