Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq3009554 104 3e-17 seq2297319 98.7 1e-15 seq2204228 95.1 2e-14 seq2190693 95.1 2e-14 seq2852841 89.7 7e-13 seq2537682 89.7 7e-13 seq2487277 89.7 7e-13 seq2212776 89.7 7e-13 seq1180450 89.7 7e-13 seq3016311 86.0 9e-12 seq2778936 86.0 9e-12 seq1925261 86.0 9e-12 seq2347442 84.2 3e-11 >seq3009554 Length=27141 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || ||||| ||||| ||||| | Sbjct 20627 CCACCTCTCAGACGAAGTACCAGGTGTAGGGTTGACTCTTTCTGAATATTGTAATCAGCC 20568 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || || || || |||||||||||||| | ||||||||| |||||| Sbjct 20567 AGAGTTCTCCCATCCTCCAACTGCTTGCCAGCAAAAATCAACCGTTGCTGATCAGGAGGA 20508 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 20507 ATACCCTCCTTATCTTG 20491 >seq2297319 Length=28675 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 |||||||| || ||||| ||||||| |||||| || | ||| || | ||| || ||| Sbjct 20363 GTAGATTCCTTCTGAATATTGTAATCTGCAAGAGTCCTTCCATCTTCAAGTTGCTTCCCA 20304 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| ||||| || |||||||| ||||||||||| |||||||| || Sbjct 20303 GCAAATATCAACCTCTGCTGATCTGGAGGAATTCCCTCTTTATCCTG 20257 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | | |||| || | ||| ||||| || ||||| ||||| | Sbjct 19483 TTCCACCTCTGAGGCGAAGGACCAGGTGAAGAGTGGATTCCTTTTGGATATTGTAATCAG 19424 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||| || | | ||| || || || ||||||||||| || | || ||||||||| |||| Sbjct 19423 CAAGGGTCCGTCCATCCTCCAACTGCTTTCCAGCAAATATGAGTCGTTGCTGATCAGGAG 19364 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| ||||| || ||||| Sbjct 19363 GAATGCCTTCCTTGTCTTG 19345 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||||||||| | ||||| || ||| || | || ||||||||||| |||||||| Sbjct 19892 ATATTATAATCAGCCAGAGTCCTATCATCTTCAAGCTGCTTTCCAGCAAAGATCAATCTC 19833 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| || ||||||||||| || ||||| Sbjct 19832 TGCTGATCTGGGGGAATTCCTTCCTTGTCTTG 19801 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| ||||||| ||| || || | ||| || | ||| || |||||||| || || || Sbjct 20576 ATATTGTAATCTGCAAGGGTCCTTCCATCTTCAAGTTGCTTCCCAGCAAAGATTAACCTC 20517 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| ||||||||||| |||||||| || Sbjct 20516 TGCTGATCTGGAGGAATTCCCTCTTTATCCTG 20485 >seq2204228 Length=211400 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| | ||| Sbjct 60577 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCCATCT 60636 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||||||||| || || | |||||||| |||||||| || || ||||| Sbjct 60637 TCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTATCC 60696 Query 146186 TG 146187 || Sbjct 60697 TG 60698 >seq2190693 Length=2135 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || ||||| ||||| ||||| | Sbjct 674 CCACCTCTTAGACGAAGTACCAGGTGTAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 615 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| | || || || ||||||||||||||| |||||| || |||||| Sbjct 614 AGAGTTCTCCCATCCTTCAACTGCTTGCCAGCAAAAATCAATTGTTGCTGGTCAGGAGGA 555 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 554 ATACCCTCCTTATCTTG 538 >seq2852841 Length=1350 Score = 89.7 bits (98), Expect = 7e-13 Identities = 86/108 (80%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 146081 GTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139 |||||||| ||| || ||||| || || | ||||| || | ||| |||| ||| || || Sbjct 1289 GTAGATTCCTTTTGA-ATATTGTAGTCAGCCAGAGTCCTCCCATCTTCTAGTTGCTTACC 1231 Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| |||||||| ||||||||||||||||| || || ||||| || Sbjct 1230 TGCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 1183 >seq2537682 Length=135956 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| | ||| Sbjct 63190 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCCATCC 63249 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||||||||| || || | |||||||| |||||||| || || || || Sbjct 63250 TCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 63309 Query 146186 TG 146187 || Sbjct 63310 TG 63311 >seq2487277 Length=79770 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || ||||| ||||| ||||| | Sbjct 69232 CCACCTCTCAGACGAAGTACCAGGTGTAGGGTTGACTCTTTTTTAATATTGTAATCAGCC 69173 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || || | || |||||||||||||| | ||| || || |||||| Sbjct 69172 AGAGTTCTCCCATCCTCCAACTACTTGCCAGCAAAAATCAACCGTTGTTGGTCAGGAGGA 69113 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 69112 ATACCCTCCTTATCTTG 69096 >seq2212776 Length=162363 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | ||||| |||| || || ||||| ||||| ||||| | Sbjct 161781 CCACCTCTCAGATGAAGTACCAGGTGTAGGGTTGACTCTTTCTGAATATTCTAATCAGCC 161722 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||| | | | ||| || || || ||||||| ||||||||||| |||||| || |||||| Sbjct 161721 AGAGCTATCCCATCCTCCAACTGCTTTCCAGAAAAAATCAATCATTGCTGGTCAGGAGGA 161662 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 161661 ATACCCTCCTTATCTTG 161645 >seq1180450 Length=1488 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || ||||| || | ||| ||||| || ||||||||||||| ||||||| ||||| Sbjct 1454 AAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGCTAGAGTTCGCCTATCT 1395 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 |||| |||||||| ||||| || || | |||||||| |||||||| || || || || Sbjct 1394 TCTAGCTGTTTTCCTGCAAATATTAAGCGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 1335 Query 146186 TG 146187 || Sbjct 1334 TG 1333 >seq3016311 Length=6421 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| || | | ||||| |||| || || | ||| ||||| ||||| | Sbjct 4170 CCACCTCCCAGACGAAGTACCAGGTGTAGGGTTGACTTTTTCTTAATATTGTAATCAGCT 4111 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| | || || || |||||||||||||| |||||| || |||||| Sbjct 4110 AGAGTTCTCCCATCCTTCAACTGCTTGCCAGCAAAAATCAACTGTTGCTGGTCAGGAGGA 4051 Query 146171 ATTCCTTCTTTATCTTG 146187 || || ||||||||||| Sbjct 4050 ATACCCTCTTTATCTTG 4034 >seq2778936 Length=561 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||||| | || | || | || ||||| || ||||| || || | | Sbjct 337 CCACCTCTAAGTCGGAGGACGAGGTGCAGGGTGGATTCCTTCTGAATATTGTAGTCAGCA 396 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || |||| || ||| ||||| || ||||||||||| ||||| | |||||||| ||||| Sbjct 397 AGGGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAGATCAAACGCTGCTGATCAGGAGGG 456 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 457 ATGCCTTCCTTGTCCTG 473 >seq1925261 Length=18002 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | | ||||| |||| || || | ||| ||||| ||||| || Sbjct 1090 CCACCTCTCAGACCAAGTACCAGGTGTAGGGTTGAATTTTTCTGAATATTGTAATCAGAC 1149 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| | || || || |||||||||||||| || ||| || |||||| Sbjct 1150 AGAGTTCTCCCATCCTTCAACTGCTTGCCAGCAAAAATCAACTGTTTCTGGTCAGGAGGA 1209 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 1210 ATACCCTCCTTATCTTG 1226 >seq2347442 Length=145553 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 |||||||| || || |||||||| | ||||| |||| || || | ||| || || Sbjct 98176 GTAGATTCCTTTTCAATGTTATAATCCGCTAGAGTCCTGCCATTTTCAAGTTGCTTACCT 98235 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 ||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 98236 GCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATC 98279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715334462666240