Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2052140 98.7 7e-16 seq1637366 98.7 7e-16 seq565282 98.7 7e-16 seq2819260 93.3 3e-14 seq2114247 87.8 1e-12 seq2366431 84.2 2e-11 seq1653420 84.2 2e-11 seq2976875 82.4 6e-11 seq1952101 82.4 6e-11 >seq2052140 Length=98983 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | || ||||| ||||| ||||||||||||||||| || Sbjct 16187 CCACCACGGAGGCGAAGGACAAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCCGCT 16246 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | |||||| | ||| || || ||| |||| | ||| || ||||| || Sbjct 16247 AGAGTCCTCCCATCTTCAAGTTGCTTCCCTGCAAAGATCAATCTCTGCTGATCGGGAGGA 16306 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || |||||||| ||| | ||| || | ||| |||||| | ||| | Sbjct 16307 ATCCCCTCCTTATCCTGAATCTTGGCCTTCACGTTATCAATAGTGTCTGAGCTCTCAACT 16366 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| | |||||||||| ||||| ||||| |||||||| Sbjct 16367 TCAAGTGTGATTGTCTTGCCGGTCAGGGTTTTGACAAAGATTTGCAT 16413 >seq1637366 Length=2671 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | || ||||| ||||| ||||||||||||||||| || Sbjct 1167 CCACCACGGAGGCGAAGGACGAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCTGCT 1226 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | || ||| | ||| || || ||| |||| | |||||| ||||| || Sbjct 1227 AGAGTCCTCCCATTTTCAAGTTGCTTCCCTGCAAAGATCAATCTTTGCTGATCGGGAGGA 1286 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || |||||||| ||| | | ||| || | ||| | |||| | ||| | Sbjct 1287 ATCCCCTCCTTATCCTGAATCTTTGCCTTCACGTTATCAATAATGTCTGAGCTCTCAACT 1346 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| | ||||| |||| |||||| ||||| |||||||| Sbjct 1347 TCAAGCGTGATTGTCTTGCCCGTCAGTGTTTTGACAAAGATTTGCAT 1393 >seq565282 Length=2859 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | || ||||| ||||| ||||||||||||||||| || Sbjct 1693 CCACCACGGAGGCGAAGGACGAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCTGCT 1634 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | || ||| | ||| || || ||| |||| | |||||| ||||| || Sbjct 1633 AGAGTCCTCCCATTTTCAAGTTGCTTCCCTGCAAAGATCAATCTTTGCTGATCGGGAGGA 1574 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || |||||||| ||| | | ||| || | ||| | |||| | ||| | Sbjct 1573 ATCCCCTCCTTATCCTGAATCTTTGCCTTCACGTTATCAATAATGTCTGAGCTCTCAACT 1514 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| | ||||| |||| |||||| ||||| |||||||| Sbjct 1513 TCAAGCGTGATTGTCTTGCCCGTCAGTGTTTTGACAAAGATTTGCAT 1467 >seq2819260 Length=3103 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||| ||||| ||||||||||| |||| ||| | ||| Sbjct 3061 AGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCCAGGGTTCGGCCATCC 3002 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| ||||||| || || || || ||| | ||||||||||| Sbjct 3001 TCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 2942 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | |||||| | | | |||||| | |||| ||| | ||||| | Sbjct 2941 TGAATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACTTCGAGAGTGATTGTC 2882 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACTCTTATAAA 18342 ||||| || | ||||| ||||| || ||||| || || || | ||||| Sbjct 2881 TTGCCAGTGAGGGTTTTAACAAAGATCTGCATCTTGAAGCTTTAATAAA 2833 >seq2114247 Length=2066 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| || | ||| || || |||||||| ||||||||||| ||||||| || || || Sbjct 1770 AAGCACAAGGTGCAGGGTCGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGACCGTC 1829 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||| ||| ||||| || ||||||| || || || || ||| | ||||||||| || Sbjct 1830 CTCCAGTTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 1889 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 || | |||||| | ||| ||||||| ||| ||| | |||||| | Sbjct 1890 TTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAACTCTCAACTTCCAAGGTGATTGT 1949 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||| || | ||||| || || || ||||| Sbjct 1950 CTTGCCCGTAAGGGTTTTGACGAAGATCTGCAT 1982 >seq2366431 Length=3899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||||| || || || || || || ||||| || || |||| || || ||| Sbjct 1758 ACCATGAAAATGGTAGAGTCCTTCTGGATGTTATAATCAGCCAAGGTACGGGCATTCTCC 1699 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG-GGCACGCCTTCCTTATCGGC 18235 ||||| || |||||| |||| | |||||| || || ||| || | | ||||| || Sbjct 1698 AATTGCTTTCCCGCAAAGATCAATCTTTGATGGTC-ACGAGGGATTTCCTCCTTGTCTCG 1640 Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCT--CGGTTTCAATGGTGATGCTT 18293 ||| | ||||| | |||| ||||| || ||| | ||||| |||||| || Sbjct 1639 AATCTTAGCCTTGAGATTATCAACGGTGTC--CGAGCTGCCAACCTCAATAGTGATGGTT 1582 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334 ||||| ||||||||||| ||||| |||||||||| ||||| Sbjct 1581 TTGCCTGTCAATGTTTTGACAAATATTTGCATTTCAAAACT 1541 >seq1653420 Length=3383 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||||| || || || || || || ||||| || || |||| || || ||| Sbjct 1758 ACCATGAAAATGGTAGAGTCCTTCTGGATGTTATAATCAGCCAAGGTACGGGCATTCTCC 1699 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG-GGCACGCCTTCCTTATCGGC 18235 ||||| || |||||| |||| | |||||| || || ||| || | | ||||| || Sbjct 1698 AATTGCTTTCCCGCAAAGATCAATCTTTGATGGTC-ACGAGGGATTTCCTCCTTGTCTCG 1640 Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCT--CGGTTTCAATGGTGATGCTT 18293 ||| | ||||| | |||| ||||| || ||| | ||||| |||||| || Sbjct 1639 AATCTTAGCCTTGAGATTATCAACGGTGTC--CGAGCTGCCAACCTCAATAGTGATGGTT 1582 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334 ||||| ||||||||||| ||||| |||||||||| ||||| Sbjct 1581 TTGCCTGTCAATGTTTTGACAAATATTTGCATTTCAAAACT 1541 >seq2976875 Length=7391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 103/139 (74%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 18128 TGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCC 18187 ||| ||||| |||||||||||||||||||| | || | | |||||| |||||| | Sbjct 163 TGTAGATTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCAGGTTGTTTCCT 104 Query 18188 CGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAAT-TTGTTGCT 18246 ||| |||| | ||||||||||||| || | || |||||||| ||| ||| | || Sbjct 103 TGCAAAGATCAATCTTTGTTGATCCGGAGGAATCCCCTCCTTATCCTGAATCTTGGT-CT 45 Query 18247 TGACCTGTGCAACAGTGTC 18265 | || | |||||||||| Sbjct 44 TCACGTTATCAACAGTGTC 26 >seq1952101 Length=51368 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || ||||| ||||| ||||||||||||||||| || | || | | |||||| | ||| Sbjct 50273 TGCAGTGTAGATTCATTTTGAATGTTGTAGTCCGCTAGAGTCCTCCCATCTTCAAGTTGC 50332 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| |||| | ||| || |||||| || | || |||||||| ||| | Sbjct 50333 TTCCCTGCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTGAATCTTC 50392 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 ||| || | ||| |||||| | ||| ||||| |||| | || ||||| Sbjct 50393 GCCTTCACGTTATCAATAGTGTCTGAGCTCTCAACTTCAAGCTTGATAGTCTTCGCGGTC 50452 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 | ||||| ||||| |||| ||| Sbjct 50453 AGGGTTTTGACAAAGATTTTCAT 50475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 365320178896890