Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2052140 98.7 7e-16
seq1637366 98.7 7e-16
seq565282 98.7 7e-16
seq2819260 93.3 3e-14
seq2114247 87.8 1e-12
seq2366431 84.2 2e-11
seq1653420 84.2 2e-11
seq2976875 82.4 6e-11
seq1952101 82.4 6e-11
>seq2052140
Length=98983
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || || | ||| || | || ||||| ||||| ||||||||||||||||| ||
Sbjct 16187 CCACCACGGAGGCGAAGGACAAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCCGCT 16246
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | | |||||| | ||| || || ||| |||| | ||| || ||||| ||
Sbjct 16247 AGAGTCCTCCCATCTTCAAGTTGCTTCCCTGCAAAGATCAATCTCTGCTGATCGGGAGGA 16306
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || |||||||| ||| | ||| || | ||| |||||| | ||| |
Sbjct 16307 ATCCCCTCCTTATCCTGAATCTTGGCCTTCACGTTATCAATAGTGTCTGAGCTCTCAACT 16366
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||||| | |||||||||| ||||| ||||| ||||||||
Sbjct 16367 TCAAGTGTGATTGTCTTGCCGGTCAGGGTTTTGACAAAGATTTGCAT 16413
>seq1637366
Length=2671
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || || | ||| || | || ||||| ||||| ||||||||||||||||| ||
Sbjct 1167 CCACCACGGAGGCGAAGGACGAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCTGCT 1226
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | | || ||| | ||| || || ||| |||| | |||||| ||||| ||
Sbjct 1227 AGAGTCCTCCCATTTTCAAGTTGCTTCCCTGCAAAGATCAATCTTTGCTGATCGGGAGGA 1286
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || |||||||| ||| | | ||| || | ||| | |||| | ||| |
Sbjct 1287 ATCCCCTCCTTATCCTGAATCTTTGCCTTCACGTTATCAATAATGTCTGAGCTCTCAACT 1346
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||||| | ||||| |||| |||||| ||||| ||||||||
Sbjct 1347 TCAAGCGTGATTGTCTTGCCCGTCAGTGTTTTGACAAAGATTTGCAT 1393
>seq565282
Length=2859
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || || | ||| || | || ||||| ||||| ||||||||||||||||| ||
Sbjct 1693 CCACCACGGAGGCGAAGGACGAGATGCAGTGTAGATTCCTTTTGAATGTTGTAGTCTGCT 1634
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | | || ||| | ||| || || ||| |||| | |||||| ||||| ||
Sbjct 1633 AGAGTCCTCCCATTTTCAAGTTGCTTCCCTGCAAAGATCAATCTTTGCTGATCGGGAGGA 1574
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || |||||||| ||| | | ||| || | ||| | |||| | ||| |
Sbjct 1573 ATCCCCTCCTTATCCTGAATCTTTGCCTTCACGTTATCAATAATGTCTGAGCTCTCAACT 1514
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||| ||||| | ||||| |||| |||||| ||||| ||||||||
Sbjct 1513 TCAAGCGTGATTGTCTTGCCCGTCAGTGTTTTGACAAAGATTTGCAT 1467
>seq2819260
Length=3103
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || ||||| ||||| ||||||||||| |||| ||| | |||
Sbjct 3061 AGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCCAGGGTTCGGCCATCC 3002
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || || || ||| ||||||| || || || || ||| | |||||||||||
Sbjct 3001 TCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTATCC 2942
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||| | |||||| | | | |||||| | |||| ||| | ||||| |
Sbjct 2941 TGAATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACTTCGAGAGTGATTGTC 2882
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACTCTTATAAA 18342
||||| || | ||||| ||||| || ||||| || || || | |||||
Sbjct 2881 TTGCCAGTGAGGGTTTTAACAAAGATCTGCATCTTGAAGCTTTAATAAA 2833
>seq2114247
Length=2066
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
||| || | ||| || || |||||||| ||||||||||| ||||||| || || ||
Sbjct 1770 AAGCACAAGGTGCAGGGTCGATTCTTTCTGAATGTTGTAATCGGCCAAGGTACGACCGTC 1829
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
|||| ||| ||||| || ||||||| || || || || ||| | ||||||||| ||
Sbjct 1830 CTCCAGTTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTC 1889
Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
|| | |||||| | ||| ||||||| ||| ||| | |||||| |
Sbjct 1890 TTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAACTCTCAACTTCCAAGGTGATTGT 1949
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || | ||||| || || || |||||
Sbjct 1950 CTTGCCCGTAAGGGTTTTGACGAAGATCTGCAT 1982
>seq2366431
Length=3899
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||||| || || || || || || ||||| || || |||| || || |||
Sbjct 1758 ACCATGAAAATGGTAGAGTCCTTCTGGATGTTATAATCAGCCAAGGTACGGGCATTCTCC 1699
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG-GGCACGCCTTCCTTATCGGC 18235
||||| || |||||| |||| | |||||| || || ||| || | | ||||| ||
Sbjct 1698 AATTGCTTTCCCGCAAAGATCAATCTTTGATGGTC-ACGAGGGATTTCCTCCTTGTCTCG 1640
Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCT--CGGTTTCAATGGTGATGCTT 18293
||| | ||||| | |||| ||||| || ||| | ||||| |||||| ||
Sbjct 1639 AATCTTAGCCTTGAGATTATCAACGGTGTC--CGAGCTGCCAACCTCAATAGTGATGGTT 1582
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334
||||| ||||||||||| ||||| |||||||||| |||||
Sbjct 1581 TTGCCTGTCAATGTTTTGACAAATATTTGCATTTCAAAACT 1541
>seq1653420
Length=3383
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||||| || || || || || || ||||| || || |||| || || |||
Sbjct 1758 ACCATGAAAATGGTAGAGTCCTTCTGGATGTTATAATCAGCCAAGGTACGGGCATTCTCC 1699
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG-GGCACGCCTTCCTTATCGGC 18235
||||| || |||||| |||| | |||||| || || ||| || | | ||||| ||
Sbjct 1698 AATTGCTTTCCCGCAAAGATCAATCTTTGATGGTC-ACGAGGGATTTCCTCCTTGTCTCG 1640
Query 18236 AATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCT--CGGTTTCAATGGTGATGCTT 18293
||| | ||||| | |||| ||||| || ||| | ||||| |||||| ||
Sbjct 1639 AATCTTAGCCTTGAGATTATCAACGGTGTC--CGAGCTGCCAACCTCAATAGTGATGGTT 1582
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334
||||| ||||||||||| ||||| |||||||||| |||||
Sbjct 1581 TTGCCTGTCAATGTTTTGACAAATATTTGCATTTCAAAACT 1541
>seq2976875
Length=7391
Score = 82.4 bits (90), Expect = 6e-11
Identities = 103/139 (74%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 18128 TGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCC 18187
||| ||||| |||||||||||||||||||| | || | | |||||| |||||| |
Sbjct 163 TGTAGATTCCTTTTGAATGTTGTAGTCGGCTAGAGTCCTCCCATCTTCAGGTTGTTTCCT 104
Query 18188 CGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAAT-TTGTTGCT 18246
||| |||| | ||||||||||||| || | || |||||||| ||| ||| | ||
Sbjct 103 TGCAAAGATCAATCTTTGTTGATCCGGAGGAATCCCCTCCTTATCCTGAATCTTGGT-CT 45
Query 18247 TGACCTGTGCAACAGTGTC 18265
| || | ||||||||||
Sbjct 44 TCACGTTATCAACAGTGTC 26
>seq1952101
Length=51368
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|| ||||| ||||| ||||||||||||||||| || | || | | |||||| | |||
Sbjct 50273 TGCAGTGTAGATTCATTTTGAATGTTGTAGTCCGCTAGAGTCCTCCCATCTTCAAGTTGC 50332
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
|| || ||| |||| | ||| || |||||| || | || |||||||| ||| |
Sbjct 50333 TTCCCTGCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTGAATCTTC 50392
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
||| || | ||| |||||| | ||| ||||| |||| | || |||||
Sbjct 50393 GCCTTCACGTTATCAATAGTGTCTGAGCTCTCAACTTCAAGCTTGATAGTCTTCGCGGTC 50452
Query 18303 AATGTTTTTACAAAAATTTGCAT 18325
| ||||| ||||| |||| |||
Sbjct 50453 AGGGTTTTGACAAAGATTTTCAT 50475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 365320178896890
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