Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2912336 93.3 8e-14 seq1924330 93.3 8e-14 >seq2912336 Length=5714 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || || ||| | ||||| ||||| || |||||||||| || | |||||||||| | ||| Sbjct 4890 ATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTTATT 4831 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCT 102069 || ||||| ||||| || ||| | |||||||||||| |||| Sbjct 4830 TCAAGGGATGAAGGCCTCCATTGTGACTTTGCATGCTTGCT 4790 >seq1924330 Length=16920 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || || ||| | ||||| ||||| || |||||||||| || | |||||||||| | ||| Sbjct 12132 ATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTTATT 12191 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCT 102069 || ||||| ||||| || ||| | |||||||||||| |||| Sbjct 12192 TCAAGGGATGAAGGCCTCCATTGTGACTTTGCATGCTTGCT 12232 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || || ||| | ||||| ||||| || |||||||||| || | |||||||||| | ||| Sbjct 15283 ATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTTATT 15342 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCT 102069 || ||||| ||||| || ||| | |||||||||||| |||| Sbjct 15343 TCAAGGGATGAAGGCCTCCATTGTGACTTTGCATGCTTGCT 15383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 951124373862510