Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1906877 86.0 5e-12
seq1860899 86.0 5e-12
>seq1906877
Length=16002
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | ||||| ||| | ||| |||||| || | || ||||| | |
Sbjct 14744 CCACCACGAAGACGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGCC 14685
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || |||| ||| || || |||||||||| | ||| || || | ||
Sbjct 14684 AGAGTACGTCCATCTTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 14625
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || ||||| || |||| | || || | ||| ||||| | ||| ||
Sbjct 14624 ATCCCCTCTTTATCCTGGATCTTAGCCTTCACGTTATCAATGGTGTCTGAACTCTCCACC 14565
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || |||||||| || || || ||||||||||| ||||||||
Sbjct 14564 TCCAAGGTAATAGTTTTCCCCGTCAGCGTTTTCACAAAGATTTGCAT 14518
>seq1860899
Length=57535
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | ||||| ||| | ||| |||||| || | || ||||| | |
Sbjct 12999 CCACCACGAAGACGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGCC 12940
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || |||| ||| || || |||||||||| | ||| || || | ||
Sbjct 12939 AGAGTACGTCCATCTTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 12880
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || ||||| || |||| | || || | ||| ||||| | ||| ||
Sbjct 12879 ATCCCCTCTTTATCCTGGATCTTAGCCTTCACGTTATCAATGGTGTCTGAACTCTCCACC 12820
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || |||||||| || || || ||||||||||| ||||||||
Sbjct 12819 TCCAAGGTAATAGTTTTCCCCGTCAGCGTTTTCACAAAGATTTGCAT 12773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 367270895276676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |