Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq2990797 96.9 3e-15 seq2886078 96.9 3e-15 seq2852841 89.7 4e-13 >seq2990797 Length=389299 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 ||| || |||| | || || | ||| | ||||||||||| || ||||||||||| || Sbjct 336809 TCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTAATCGGC 336750 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 | ||| | ||||||||||| ||||| ||| | || || ||||||||||| || Sbjct 336749 GAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATCAGGAGG 336690 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | || || ||||| ||| ||| |||||| | | | ||||||| ||| Sbjct 336689 AATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCTCTCAAC 336630 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 336629 TTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 336582 >seq2886078 Length=74263 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 ||| || |||| | || || | ||| | ||||||||||| || ||||||||||| || Sbjct 37083 TCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTAATCGGC 37024 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 | ||| | ||||||||||| ||||| ||| | || || ||||||||||| || Sbjct 37023 GAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATCAGGAGG 36964 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | || || ||||| ||| ||| |||||| | | | ||||||| ||| Sbjct 36963 AATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCTCTCAAC 36904 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || || ||||| || || || ||||| ||||| || ||||| Sbjct 36903 TTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 36856 >seq2852841 Length=1350 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||||||| | ||||| ||||| ||||| | ||||| || | ||| | | ||||| Sbjct 944 ACCATGTGAAGAGTAGATTCCTTCTGAATGTGATAATCTGCGAGGGTTCGGCCATCCTCA 885 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 |||||||| || ||| |||| || ||||||||||| ||| | ||||| ||||| Sbjct 884 AGCTGTTTGCCAGCAAAAATGAGCCTCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGG 825 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||| || || | | | | |||||| |||| || | || ||||| || Sbjct 824 ATCTTCGCCTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCAAGAGTTATGGTCTTT 765 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATTTT-AAATCT 19050 || || || || || || || || |||||||| |||||| Sbjct 764 CCGGTCAATGTCTTCACGAATATCTGCATTTTGAAATCT 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399246619062868