Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq2990797 96.9 3e-15
seq2886078 96.9 3e-15
seq2852841 89.7 4e-13
>seq2990797
Length=389299
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873
||| || |||| | || || | ||| | ||||||||||| || ||||||||||| ||
Sbjct 336809 TCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTAATCGGC 336750
Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933
| ||| | ||||||||||| ||||| ||| | || || ||||||||||| ||
Sbjct 336749 GAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATCAGGAGG 336690
Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993
| || || ||||| ||| ||| |||||| | | | ||||||| |||
Sbjct 336689 AATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCTCTCAAC 336630
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 336629 TTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 336582
>seq2886078
Length=74263
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873
||| || |||| | || || | ||| | ||||||||||| || ||||||||||| ||
Sbjct 37083 TCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTAATCGGC 37024
Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933
| ||| | ||||||||||| ||||| ||| | || || ||||||||||| ||
Sbjct 37023 GAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATCAGGAGG 36964
Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993
| || || ||||| ||| ||| |||||| | | | ||||||| |||
Sbjct 36963 AATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCTCTCAAC 36904
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 36903 TTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 36856
>seq2852841
Length=1350
Score = 89.7 bits (98), Expect = 4e-13
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||||||| | ||||| ||||| ||||| | ||||| || | ||| | | |||||
Sbjct 944 ACCATGTGAAGAGTAGATTCCTTCTGAATGTGATAATCTGCGAGGGTTCGGCCATCCTCA 885
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
|||||||| || ||| |||| || ||||||||||| ||| | ||||| |||||
Sbjct 884 AGCTGTTTGCCAGCAAAAATGAGCCTCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTGG 825
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
|| ||| || || | | | | |||||| |||| || | || ||||| ||
Sbjct 824 ATCTTCGCCTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCAAGAGTTATGGTCTTT 765
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATTTT-AAATCT 19050
|| || || || || || || || |||||||| ||||||
Sbjct 764 CCGGTCAATGTCTTCACGAATATCTGCATTTTGAAATCT 726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399246619062868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |