Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2019908 84.2 1e-11 seq1039624 84.2 1e-11 seq2546035 82.4 5e-11 seq2282228 82.4 5e-11 >seq2019908 Length=144052 Score = 84.2 bits (92), Expect = 1e-11 Identities = 142/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAAT-TGAGTTGGTCATCCAATTGCTTTCC 33231 || || || ||||| ||||||||||||| ||| | | | ||| || | |||||||| Sbjct 124753 GTAGATTCCTTTTGAATATTGTAATCAG-CAAGTGTTCGCCCGTCTTCAAGCTGCTTTCC 124811 Query 33232 ACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTG 33288 | ||| || | ||| |||||||| | ||| |||||||| || || | | | ||| Sbjct 124812 AGCAAAGATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC-- 124869 Query 33289 TTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAG 33348 || || | | ||| ||||| | || ||| |||| ||||||||| || || || || Sbjct 124870 -TTGACATTGTCAATGGTGTCTGAGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAG 124928 Query 33349 AGTTTTTACGAAAATTTGCATG 33370 ||||| || || || |||||| Sbjct 124929 GGTTTTGACAAAGATCTGCATG 124950 >seq1039624 Length=3010 Score = 84.2 bits (92), Expect = 1e-11 Identities = 142/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAAT-TGAGTTGGTCATCCAATTGCTTTCC 33231 || || || ||||| ||||||||||||| ||| | | | ||| || | |||||||| Sbjct 1479 GTAGATTCCTTTTGAATATTGTAATCAG-CAAGTGTTCGCCCGTCTTCAAGCTGCTTTCC 1537 Query 33232 ACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTG 33288 | ||| || | ||| |||||||| | ||| |||||||| || || | | | ||| Sbjct 1538 AGCAAAGATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC-- 1595 Query 33289 TTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAG 33348 || || | | ||| ||||| | || ||| |||| ||||||||| || || || || Sbjct 1596 -TTGACATTGTCAATGGTGTCTGAGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAG 1654 Query 33349 AGTTTTTACGAAAATTTGCATG 33370 ||||| || || || |||||| Sbjct 1655 GGTTTTGACAAAGATCTGCATG 1676 >seq2546035 Length=46904 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 14/206 (7%) Strand=Plus/Plus Query 33172 TGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCAATTGCT 33227 |||||| ||||| || ||||||||||||| ||| | ||| | || || | || | Sbjct 9469 TGTCGATTCTTTCTGAATATTGTAATCAG-CAA---GGGTTCGGCCATCTTCGAGCTGTT 9524 Query 33228 TTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCG 33284 ||||| ||| || | ||| |||||||| | ||| |||||||| || || | | | | Sbjct 9525 TTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGG 9584 Query 33285 CCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCG 33344 || || || | | ||| ||||| | | ||| |||| ||| ||||| || |||| Sbjct 9585 CC---TTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTGATCGTCTTACCCG 9641 Query 33345 TAAGAGTTTTTACGAAAATTTGCATG 33370 | || ||||| ||||| || |||||| Sbjct 9642 TGAGGGTTTTGACGAAGATCTGCATG 9667 >seq2282228 Length=14079 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 14/206 (7%) Strand=Plus/Minus Query 33172 TGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCAATTGCT 33227 |||||| ||||| || ||||||||||||| ||| | ||| | || || | || | Sbjct 1033 TGTCGATTCTTTCTGAATATTGTAATCAG-CAA---GGGTTCGGCCATCTTCGAGCTGTT 978 Query 33228 TTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCG 33284 ||||| ||| || | ||| |||||||| | ||| |||||||| || || | | | | Sbjct 977 TTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGG 918 Query 33285 CCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCG 33344 || || || | | ||| ||||| | | ||| |||| ||| ||||| || |||| Sbjct 917 CC---TTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTGATCGTCTTACCCG 861 Query 33345 TAAGAGTTTTTACGAAAATTTGCATG 33370 | || ||||| ||||| || |||||| Sbjct 860 TGAGGGTTTTGACGAAGATCTGCATG 835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 306992834631156