Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq2297319 104 2e-17
seq2990797 89.7 4e-13
>seq2297319
Length=28675
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|| |||||||| | | |||| || || || || || || ||||||||||| |
Sbjct 19709 CCACCTCTCAAACGCAGATCCAAGTGAAGAGTTGATTCCTTCTGGATATTATAATCAGCT 19650
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
|| ||| |||| |||| ||| || || ||| | |||| | |||||||||| |||||
Sbjct 19649 AAGGTACGGCCATCCTCCAGTTGCTTGCCAGCATAGATCACCTGTTGCTGGTCAAGAGGT 19590
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
|||| || || ||| ||| ||| ||||| || ||| ||| || | || ||
Sbjct 19589 GCACCATCCTTGTCTTGAATCTTTGCCTTGACATTATCAATAGTTTCCGTACTGTCAACC 19530
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| ||||| |||||||| ||||| ||||||||
Sbjct 19529 TCAAGAGTGATGGTTTTTCCGGTCAAAGTCTTAACAAAGATTTGCAT 19483
>seq2990797
Length=389299
Score = 89.7 bits (98), Expect = 4e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||| ||||||||||| ||||||| ||||| ||| |||| | || || |
Sbjct 336510 CATCTTCAAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGATCCGGAGGAATCCCCTCCT 336451
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
| || ||| ||| || || || ||| |||||| | ||| || |||| |||||
Sbjct 336450 TGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAGAGCTCTCAACTTCGAGCGTAA 336391
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || || ||||| | || |||||||| ||||||||
Sbjct 336390 TGGTCTTGCCGGTCAGGGTTTTCACAAAGATTTGCAT 336354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 341661964603656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |