Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2297319 104 2e-17 seq2990797 89.7 4e-13 >seq2297319 Length=28675 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 || |||||||| | | |||| || || || || || || ||||||||||| | Sbjct 19709 CCACCTCTCAAACGCAGATCCAAGTGAAGAGTTGATTCCTTCTGGATATTATAATCAGCT 19650 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || ||| |||| |||| ||| || || ||| | |||| | |||||||||| ||||| Sbjct 19649 AAGGTACGGCCATCCTCCAGTTGCTTGCCAGCATAGATCACCTGTTGCTGGTCAAGAGGT 19590 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 |||| || || ||| ||| ||| ||||| || ||| ||| || | || || Sbjct 19589 GCACCATCCTTGTCTTGAATCTTTGCCTTGACATTATCAATAGTTTCCGTACTGTCAACC 19530 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| ||||| |||||||| ||||| |||||||| Sbjct 19529 TCAAGAGTGATGGTTTTTCCGGTCAAAGTCTTAACAAAGATTTGCAT 19483 >seq2990797 Length=389299 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||| ||||||||||| ||||||| ||||| ||| |||| | || || | Sbjct 336510 CATCTTCAAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGATCCGGAGGAATCCCCTCCT 336451 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | || ||| ||| || || || ||| |||||| | ||| || |||| ||||| Sbjct 336450 TGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAGAGCTCTCAACTTCGAGCGTAA 336391 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || || ||||| | || |||||||| |||||||| Sbjct 336390 TGGTCTTGCCGGTCAGGGTTTTCACAAAGATTTGCAT 336354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 341661964603656