Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq2065080 111 2e-19 >seq2065080 Length=53610 Score = 111 bits (122), Expect = 2e-19 Identities = 270/405 (67%), Gaps = 8/405 (2%) Strand=Plus/Minus Query 147120 ttttATAACGCTGTTTCAACTCAAAAACTTTCGCTACCTACACCGATTATGGCAGGCGTT 147179 |||||| ||||| |||| ||| | | | || ||||| ||||||||||||||||| || Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 147180 CGTACCCCGACACGTCAATTTAGCTCGTGTGTGAAAATCGAATCTGGCGACTCGCTGCGT 147239 | || || || | ||||||||||| ||||| ||| |||| || || | | Sbjct 24776 AGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTAGAT 24717 Query 147240 TCGATCAA--CAAGGTATCTGAAGCTATCGTTGATTACATTAGTAAACGTGCGGGTATTG 147297 || || || ||| | || | || || | || | | || | || || |||| Sbjct 24716 TCTATTAATGCAAC--AGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATTG 24659 Query 147298 GCGTAAACGGTGGTGCAATTCGAGCAGAGGGTTCGGTTGTACGTGCGGGTGAA--ATTCG 147355 | | || | || |||||| || | || | | | | || ||| ||| Sbjct 24658 GAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATT-- 24601 Query 147356 TCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCTCA 147415 ||| ||||| || ||||||| ||||| ||||| ||||| |||||||| || ||||| Sbjct 24600 TCATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCA 24541 Query 147416 AGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGTAGA 147475 |||||| || | || |||||||| |||||| ||| || || ||||| ||||||||||| Sbjct 24540 AGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGA 24481 Query 147476 AAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCG 147520 || | | ||| | || || || | ||| | ||||| || || Sbjct 24480 GAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCG 24436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753639238973280