Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2990797 89.7 4e-13 seq2886078 89.7 4e-13 >seq2990797 Length=389299 Score = 89.7 bits (98), Expect = 4e-13 Identities = 164/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 19972 TTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTT 20031 |||||| ||| || || | | ||| || | || |||||||| || || || || || Sbjct 336818 TTATCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATT 336759 Query 20032 GTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTG 20091 ||||||| | | |||| ||| |||| || || || ||| | || |||||||| || Sbjct 336758 GTAATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTG 336699 Query 20092 ATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCC 20151 ||| || | ||||| ||||| ||| || ||| || | ||| || |||| Sbjct 336698 ATCAGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGG- 336640 Query 20152 AGGT-TCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || ||||| || || |||||||| ||||||||||| ||||| || ||||| Sbjct 336639 AGCTCTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 336582 >seq2886078 Length=74263 Score = 89.7 bits (98), Expect = 4e-13 Identities = 164/238 (69%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 19972 TTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTT 20031 |||||| ||| || || | | ||| || | || |||||||| || || || || || Sbjct 37092 TTATCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATT 37033 Query 20032 GTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTG 20091 ||||||| | | |||| ||| |||| || || || ||| | || |||||||| || Sbjct 37032 GTAATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTG 36973 Query 20092 ATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCC 20151 ||| || | ||||| ||||| ||| || ||| || | ||| || |||| Sbjct 36972 ATCAGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGG- 36914 Query 20152 AGGT-TCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || ||||| || || |||||||| ||||||||||| ||||| || ||||| Sbjct 36913 AGCTCTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 36856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404075643655482