Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq2990797 89.7 4e-13
seq2886078 89.7 4e-13
>seq2990797
Length=389299
Score = 89.7 bits (98), Expect = 4e-13
Identities = 164/238 (69%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 19972 TTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTT 20031
|||||| ||| || || | | ||| || | || |||||||| || || || || ||
Sbjct 336818 TTATCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATT 336759
Query 20032 GTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTG 20091
||||||| | | |||| ||| |||| || || || ||| | || |||||||| ||
Sbjct 336758 GTAATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTG 336699
Query 20092 ATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCC 20151
||| || | ||||| ||||| ||| || ||| || | ||| || ||||
Sbjct 336698 ATCAGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGG- 336640
Query 20152 AGGT-TCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| | || ||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct 336639 AGCTCTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 336582
>seq2886078
Length=74263
Score = 89.7 bits (98), Expect = 4e-13
Identities = 164/238 (69%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 19972 TTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTT 20031
|||||| ||| || || | | ||| || | || |||||||| || || || || ||
Sbjct 37092 TTATCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATT 37033
Query 20032 GTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTG 20091
||||||| | | |||| ||| |||| || || || ||| | || |||||||| ||
Sbjct 37032 GTAATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTG 36973
Query 20092 ATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCC 20151
||| || | ||||| ||||| ||| || ||| || | ||| || ||||
Sbjct 36972 ATCAGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGG- 36914
Query 20152 AGGT-TCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| | || ||||| || || |||||||| ||||||||||| ||||| || |||||
Sbjct 36913 AGCTCTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCAT 36856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404075643655482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |