Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq2065080 122 1e-22 >seq2065080 Length=53610 Score = 122 bits (134), Expect = 1e-22 Identities = 272/406 (67%), Gaps = 2/406 (0%) Strand=Plus/Plus Query 43625 TTGTTGATTTGGATACCGTAGTCAAGCTGGCGAATTCGATTTTCTTCCACGCCCTTGTTG 43684 || || ||||| ||| |||| || | || | | |||||| ||||| | || | || Sbjct 24400 TTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTA 24459 Query 43685 TTTTTCAGAACAAGGATTTTTTCAACTTCAAGATGCCACATTGGATAGTAAAGAGTAGCA 43744 ||||| | ||| | | || || ||||| | |||||| || ||||| | ||||||||| Sbjct 24460 TTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCA 24519 Query 43745 GCGCCACCGCGTACACCACCCTGTGAGCAACTTTTTACCGCAGTCTGGAAATATTTCCAG 43804 || || || | || ||||| || ||||| ||| || ||||| || |||| ||| || Sbjct 24520 GCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAG 24579 Query 43805 AACGGAATAATACCAGTGTGGCGAACTTCACCACTTCGAATGCGAGAACCTTCGGCACGA 43864 || || ||| |||||| || |||| || | || ||| || || | |||||| Sbjct 24580 AAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGA 24639 Query 43865 ATAGCGCCACCGTTGATACCGATACCAGCGCGTTTGCTA-ATATAGTCAACGATTGAACT 43923 || || | || || || || || || | |||| | | ||| | || |||||||| Sbjct 24640 ATTTGCCCTACATTAATTCCAATTCCTGCTC-TTTGAGATACATATTTTACTATTGAACT 24698 Query 43924 TGCGGTAGCGTTAATGCTATCGAGTTCGTCGCCGCTTTCGATCTTCACGCATGAGCTAAA 43983 || || || ||||| ||| | | || | | ||| || || || |||||||| Sbjct 24699 AGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758 Query 43984 CTGGCGAGTCGGGGTTCGAACACCAGCAAGAATTGGCGTCGGTAGA 44029 || | ||| || |||| ||||| || | ||| || || |||||| Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGA 24804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717926700381280