Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2958171 87.8 1e-12 seq1884690 87.8 1e-12 seq1874763 87.8 1e-12 seq2019908 86.0 5e-12 seq1039624 86.0 5e-12 seq2990797 82.4 6e-11 seq2886078 82.4 6e-11 seq2052140 82.4 6e-11 >seq2958171 Length=11077 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| |||||| || | ||||||| |||||||||| || || Sbjct 9743 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 9802 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| || || | | |||||||||| || || ||||| | Sbjct 9803 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 9862 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | ||||| || || || ||||| ||||| ||| Sbjct 9863 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 9922 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 9923 AAGATCTGCAT 9933 >seq1884690 Length=23820 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| |||||| || | ||||||| |||||||||| || || Sbjct 18472 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 18413 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| || || | | |||||||||| || || ||||| | Sbjct 18412 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 18353 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | ||||| || || || ||||| ||||| ||| Sbjct 18352 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 18293 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 18292 AAGATCTGCAT 18282 >seq1874763 Length=7899 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| |||||| || | ||||||| |||||||||| || || Sbjct 2403 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 2344 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| || || | | |||||||||| || || ||||| | Sbjct 2343 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 2284 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | ||||| || || || ||||| ||||| ||| Sbjct 2283 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 2224 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 2223 AAGATCTGCAT 2213 >seq2019908 Length=144052 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 |||||||| || |||||||| || | ||| | || || |||||||| ||| | | Sbjct 125215 TCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 125274 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || ||||||||||||||| || | | ||||||||| || || ||| | | Sbjct 125275 ATCAAACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 125334 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| ||||| || || || ||||| |||||||| || ||| Sbjct 125335 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATCGTCTTACCAGTGAGAGTCTTGACA 125394 Query 48716 AAAATCTGCATCGTG 48730 |||||||||||| || Sbjct 125395 AAAATCTGCATCTTG 125409 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||||||||| ||||||||||| | | |||| |||| || |||||||| || | | Sbjct 124759 TCCTTTTGAATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 124818 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | |||||||||| || || ||||| | Sbjct 124819 ATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 124878 Query 48656 GCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | || | | | || | ||||| || || || ||||| ||||| || Sbjct 124879 TCAATGGTGTCTG-AGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGAC 124937 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 124938 AAAGATCTGCAT 124949 >seq1039624 Length=3010 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 |||||||| || |||||||| || | ||| | || || |||||||| ||| | | Sbjct 1941 TCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 2000 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || ||||||||||||||| || | | ||||||||| || || ||| | | Sbjct 2001 ATCAAACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 2060 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| ||||| || || || ||||| |||||||| || ||| Sbjct 2061 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATCGTCTTACCAGTGAGAGTCTTGACA 2120 Query 48716 AAAATCTGCATCGTG 48730 |||||||||||| || Sbjct 2121 AAAATCTGCATCTTG 2135 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||||||||| ||||||||||| | | |||| |||| || |||||||| || | | Sbjct 1485 TCCTTTTGAATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 1544 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | |||||||||| || || ||||| | Sbjct 1545 ATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 1604 Query 48656 GCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | || | | | || | ||||| || || || ||||| ||||| || Sbjct 1605 TCAATGGTGTCTG-AGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGAC 1663 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 1664 AAAGATCTGCAT 1675 >seq2990797 Length=389299 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/235 (68%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 48494 TCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTA 48552 |||||| || || |||| | || || | |||||||| |||||| || || ||||| Sbjct 336815 TCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTA 336756 Query 48553 ATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 ||| || | |||| | ||||||||||||||||| | | || | | ||||||||| Sbjct 336755 ATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATC 336696 Query 48613 CACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGA 48672 || | | |||||||||| ||| ||| || | | | || ||||||| Sbjct 336695 AGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCT 336636 Query 48673 CTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || | || || ||||| || || | ||||||||||| ||||||||| Sbjct 336635 CTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCATC 336581 >seq2886078 Length=74263 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/235 (68%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 48494 TCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTA 48552 |||||| || || |||| | || || | |||||||| |||||| || || ||||| Sbjct 37089 TCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTA 37030 Query 48553 ATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 ||| || | |||| | ||||||||||||||||| | | || | | ||||||||| Sbjct 37029 ATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATC 36970 Query 48613 CACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGA 48672 || | | |||||||||| ||| ||| || | | | || ||||||| Sbjct 36969 AGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCT 36910 Query 48673 CTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || | || || ||||| || || | ||||||||||| ||||||||| Sbjct 36909 CTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCATC 36855 >seq2052140 Length=98983 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| |||||||| ||||| |||| |||| | |||||||||||| Sbjct 15983 TGGAGGGTGGACTCCTTCTGAATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGC 16042 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| | |||| | | ||||||||| || | || ||||||||| ||| || Sbjct 16043 TTGCCGGCAAAAATGAGCCTCTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTT 16102 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | || ||||| | ||| ||| | ||| ||||| || || || Sbjct 16103 GCCTTCACGTTATCAATTGTATCAGAGCTCTCAACCTCCAGTGTGATGGTCTTGCCTGTC 16162 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 | || |||||||| |||||||| Sbjct 16163 AACGTCTTCACAAATATCTGCAT 16185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405678127885322