Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2958171 87.8 1e-12
seq1884690 87.8 1e-12
seq1874763 87.8 1e-12
seq2019908 86.0 5e-12
seq1039624 86.0 5e-12
seq2990797 82.4 6e-11
seq2886078 82.4 6e-11
seq2052140 82.4 6e-11
>seq2958171
Length=11077
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| |||||||||||||| |||||| || | ||||||| |||||||||| || ||
Sbjct 9743 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 9802
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | | |||||| || || | | |||||||||| || || ||||| |
Sbjct 9803 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 9862
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| || | ||||| || || || ||||| ||||| |||
Sbjct 9863 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 9922
Query 48716 AAAATCTGCAT 48726
|| ||||||||
Sbjct 9923 AAGATCTGCAT 9933
>seq1884690
Length=23820
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| |||||||||||||| |||||| || | ||||||| |||||||||| || ||
Sbjct 18472 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 18413
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | | |||||| || || | | |||||||||| || || ||||| |
Sbjct 18412 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 18353
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| || | ||||| || || || ||||| ||||| |||
Sbjct 18352 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 18293
Query 48716 AAAATCTGCAT 48726
|| ||||||||
Sbjct 18292 AAGATCTGCAT 18282
>seq1874763
Length=7899
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| |||||||||||||| |||||| || | ||||||| |||||||||| || ||
Sbjct 2403 TCCTTCTGAATGTTGTAATCGGCCAATGTCCGGCCATCCTCCAACTGCTTACCGGCGAAA 2344
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | | |||||| || || | | |||||||||| || || ||||| |
Sbjct 2343 ATAAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 2284
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| || | ||||| || || || ||||| ||||| |||
Sbjct 2283 TCGATGGTGTCTGAGCTCTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGACA 2224
Query 48716 AAAATCTGCAT 48726
|| ||||||||
Sbjct 2223 AAGATCTGCAT 2213
>seq2019908
Length=144052
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|||||||| || |||||||| || | ||| | || || |||||||| ||| | |
Sbjct 125215 TCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 125274
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| ||||||||||||||| || | | ||||||||| || || ||| | |
Sbjct 125275 ATCAAACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 125334
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| ||||| || || || ||||| |||||||| || |||
Sbjct 125335 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATCGTCTTACCAGTGAGAGTCTTGACA 125394
Query 48716 AAAATCTGCATCGTG 48730
|||||||||||| ||
Sbjct 125395 AAAATCTGCATCTTG 125409
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||||||||| ||||||||||| | | |||| |||| || |||||||| || | |
Sbjct 124759 TCCTTTTGAATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 124818
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | |||||||||| || || ||||| |
Sbjct 124819 ATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 124878
Query 48656 GCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| || | || | | | || | ||||| || || || ||||| ||||| ||
Sbjct 124879 TCAATGGTGTCTG-AGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGAC 124937
Query 48715 AAAAATCTGCAT 48726
||| ||||||||
Sbjct 124938 AAAGATCTGCAT 124949
>seq1039624
Length=3010
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|||||||| || |||||||| || | ||| | || || |||||||| ||| | |
Sbjct 1941 TCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 2000
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| ||||||||||||||| || | | ||||||||| || || ||| | |
Sbjct 2001 ATCAAACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 2060
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| ||||| || || || ||||| |||||||| || |||
Sbjct 2061 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATCGTCTTACCAGTGAGAGTCTTGACA 2120
Query 48716 AAAATCTGCATCGTG 48730
|||||||||||| ||
Sbjct 2121 AAAATCTGCATCTTG 2135
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||||||||| ||||||||||| | | |||| |||| || |||||||| || | |
Sbjct 1485 TCCTTTTGAATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 1544
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | |||||||||| || || ||||| |
Sbjct 1545 ATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 1604
Query 48656 GCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| || | || | | | || | ||||| || || || ||||| ||||| ||
Sbjct 1605 TCAATGGTGTCTG-AGCTTTCAACTTCCAAAGTTATCGTCTTGCCAGTGAGGGTTTTGAC 1663
Query 48715 AAAAATCTGCAT 48726
||| ||||||||
Sbjct 1664 AAAGATCTGCAT 1675
>seq2990797
Length=389299
Score = 82.4 bits (90), Expect = 6e-11
Identities = 160/235 (68%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 48494 TCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTA 48552
|||||| || || |||| | || || | |||||||| |||||| || || |||||
Sbjct 336815 TCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTA 336756
Query 48553 ATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612
||| || | |||| | ||||||||||||||||| | | || | | |||||||||
Sbjct 336755 ATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATC 336696
Query 48613 CACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGA 48672
|| | | |||||||||| ||| ||| || | | | || |||||||
Sbjct 336695 AGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCT 336636
Query 48673 CTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| || | || || ||||| || || | ||||||||||| |||||||||
Sbjct 336635 CTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCATC 336581
>seq2886078
Length=74263
Score = 82.4 bits (90), Expect = 6e-11
Identities = 160/235 (68%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 48494 TCAAAA-CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTA 48552
|||||| || || |||| | || || | |||||||| |||||| || || |||||
Sbjct 37089 TCAAAATCCACCACGCAGACGCAAGACGAGGTGAAGTGTAGACTCCTTCTGGATATTGTA 37030
Query 48553 ATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612
||| || | |||| | ||||||||||||||||| | | || | | |||||||||
Sbjct 37029 ATCGGCGAGAGTTCGCCCATCCTCCAGCTGCTTACCAGCAAATATCAGCCTCTGCTGATC 36970
Query 48613 CACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGA 48672
|| | | |||||||||| ||| ||| || | | | || |||||||
Sbjct 36969 AGGAGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCAATAGTATCGGAGCT 36910
Query 48673 CTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| || | || || ||||| || || | ||||||||||| |||||||||
Sbjct 36909 CTCAACTTCCAGAGTGATCGTTTTGCCCGTCAACGTTTTCACAAATATCTGCATC 36855
>seq2052140
Length=98983
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| |||||||| ||||| |||| |||| | ||||||||||||
Sbjct 15983 TGGAGGGTGGACTCCTTCTGAATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGC 16042
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| | |||| | | ||||||||| || | || ||||||||| ||| ||
Sbjct 16043 TTGCCGGCAAAAATGAGCCTCTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTT 16102
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | || ||||| | ||| ||| | ||| ||||| || || ||
Sbjct 16103 GCCTTCACGTTATCAATTGTATCAGAGCTCTCAACCTCCAGTGTGATGGTCTTGCCTGTC 16162
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
| || |||||||| ||||||||
Sbjct 16163 AACGTCTTCACAAATATCTGCAT 16185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405678127885322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |