Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq2065080 140 4e-28 >seq2065080 Length=53610 Score = 140 bits (154), Expect = 4e-28 Identities = 242/352 (69%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 41798 TACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAG 41857 |||| || || |||||||| ||||| | |||||||| | || ||| | ||| || Sbjct 24802 TACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTT 24743 Query 41858 TGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGT 41917 | ||||||| | |||| | | |||| | ||||| | | | | || || || | Sbjct 24742 TAATTGAATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAAT 24683 Query 41918 ATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGTTCTA 41977 || | || ||| | || || || || |||||| || || ||||| || | || | Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTC 24623 Query 41978 AAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAGA 42037 || | || || |||||| | ||||| || || || |||| |||||| |||| | Sbjct 24622 CTATTAGAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAA 24563 Query 42038 CAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATC 42097 | || ||||||||||| || |||||||| ||| | || |||||||| || ||| ||||| Sbjct 24562 CTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATC 24503 Query 42098 CGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGG 42149 | || |||||||| ||||| || || || | ||| | ||||| || | ||| Sbjct 24502 CTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGG 24451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555576268475200