Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3012833 95.1 1e-14 seq2549946 93.3 4e-14 seq1935421 93.3 4e-14 seq2819260 87.8 2e-12 seq1637366 87.8 2e-12 seq565282 87.8 2e-12 seq2052140 84.2 2e-11 seq1835634 84.2 2e-11 >seq3012833 Length=100759 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| ||||| | || || || | ||||| ||||| | || Sbjct 36528 AATGCAAATCTTTGTGAAAACCCTGACGGGCAAGACCATCACGCTCGAAGTTGAGAGCTC 36587 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| || || || | || || |||||| ||||| || ||||| ||||| ||||| Sbjct 36588 CGATACGATTGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGGATTCCTCCGGATCA 36647 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATA 26946 |||||| | || | | || |||||||| ||||||| || | | | ||| |||||| Sbjct 36648 GCAAAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGA-CTTTGGCGGACTATA 36706 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| ||||| ||||| | ||||| ||||| Sbjct 36707 ACATTCAGAAAGAGTCTACCCTGCATCTTGTCCT 36740 >seq2549946 Length=35353 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | |||||||| ||||| |||||||| | |||||| | || | || Sbjct 28267 CAATATGCAGATATTTGTAAAGACATTGACTGGAAAGACAATCACCCTTGAGGTGGAG-- 28210 Query 26825 AAAC---GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| || ||||| || | || || ||||| ||||| || || || ||||| Sbjct 28209 -AACTCTGATACCATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCC 28151 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 |||||| || | ||||| | | ||||| ||| | || || | | | | || ||| Sbjct 28150 CGATCAGCAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGACGGTCGCACTCTCGCCGA 28091 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| ||||| ||||| ||| |||| || ||||| | || ||||| |||| Sbjct 28090 CTACAACATCCAAAAGGAATCCACTCTCCACCTCGTCCTCCGTCTCAGAGGTGGAA 28035 >seq1935421 Length=88102 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | |||||||| ||||| |||||||| | |||||| | || | || Sbjct 3564 CAATATGCAGATATTTGTAAAGACATTGACTGGAAAGACAATCACCCTTGAGGTGGAG-- 3507 Query 26825 AAAC---GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 ||| || ||||| || | || || ||||| ||||| || || || ||||| Sbjct 3506 -AACTCTGATACCATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCC 3448 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 |||||| || | ||||| | | ||||| ||| | || || | | | | || ||| Sbjct 3447 CGATCAGCAGCGTCTCATCTTTGCTGGCAAGCAATTGGAGGACGGTCGCACTCTCGCCGA 3388 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| ||||| ||||| ||| |||| || ||||| | || ||||| |||| Sbjct 3387 CTACAACATCCAAAAGGAATCCACTCTCCACCTCGTCCTCCGTCTCAGAGGTGGAA 3332 >seq2819260 Length=3103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | ||||| ||||| | ||||| || | ||||| ||||| | || Sbjct 2846 CAAGATGCAGATCTTTGTTAAAACCCTCACTGGCAAGACAATCACTCTCGAAGTCGAGAG 2905 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||| | ||||| |||||| || || |||||||| || || || Sbjct 2906 CTCTGACACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGGATTCCCCCAGA 2965 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || || || || | | ||| || || ||||| |||| ||| | | ||||| Sbjct 2966 CCAGCAGAGGCTTATCTTTGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTGGCGGACTA 3025 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| |||||||| |||| ||||| || Sbjct 3026 CAACATCCAAAAGGAATCTACCCTCCACCTGGTTCT 3061 >seq1637366 Length=2671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 |||||| | ||||| |||||| | || || || | ||||| | ||| | || | | | Sbjct 1393 ATGCAAATCTTTGTCAAAACACTGACGGGCAAGACAATCACGCTTGAAGTTGAGAGCTCA 1334 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| || || | || || ||||||| || || || ||||| ||||||||||| Sbjct 1333 -GACATTATTGATAACGTGAAGGCAAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 1275 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 |||||| | || | | || || ||||| ||| ||| || | | ||| ||||| | Sbjct 1274 GCAAAGATTGATCTTTGCAGGGAAGCAACTTGAAAATGGGAGGACTCT-AGCAGACTACA 1216 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||| |||||||| | ||||| ||||| Sbjct 1215 ACATTCAAAAGGAATCTACACTGCATCTCGTCCT 1182 >seq565282 Length=2859 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 |||||| | ||||| |||||| | || || || | ||||| | ||| | || | | | Sbjct 1467 ATGCAAATCTTTGTCAAAACACTGACGGGCAAGACAATCACGCTTGAAGTTGAGAGCTCA 1526 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| || || | || || ||||||| || || || ||||| ||||||||||| Sbjct 1527 -GACATTATTGATAACGTGAAGGCAAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 1585 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 |||||| | || | | || || ||||| ||| ||| || || ||| ||||| | Sbjct 1586 GCAAAGATTGATCTTTGCAGGGAAGCAACTTGAAAATGGGAG-GACTCTAGCAGACTACA 1644 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||| |||||||| | ||||| ||||| Sbjct 1645 ACATTCAAAAGGAATCTACACTGCATCTCGTCCT 1678 >seq2052140 Length=98983 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 |||||| | ||||| ||||| | || || || | ||||| | ||| | || | | | Sbjct 16413 ATGCAAATCTTTGTCAAAACCCTGACCGGCAAGACAATCACACTTGAAGTTGAGAGCTCA 16354 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || || | || || |||||| || || || ||||| ||||||||||| Sbjct 16353 -GACACTATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAGGGGATTCCTCCCGATCA 16295 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATA 26946 || ||| | || | | || || ||||| ||||||| || | | |||| |||| | Sbjct 16294 GCAGAGATTGATCTTTGCAGGGAAGCAACTTGAAGATGGGAGGACTCT-AGCGGACTACA 16236 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||| |||||||| | ||||| ||||| Sbjct 16235 ACATTCAAAAGGAATCTACACTGCATCTTGTCCT 16202 >seq1835634 Length=113921 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| ||||| || ||||| ||||||||||| ||||||| | || ||| Sbjct 54403 AAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAAAGGCTCATTTTTGTGGGAAAA 54462 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 || | || |||| ||| | || ||| ||||||||||| || |||||||| | || Sbjct 54463 CAGTTGGAGGATGGCTGAACCTTCGCCGATTATAACATTCATAAGGAATCTACCCTTCAC 54522 Query 26973 CTGGTCCTG 26981 || ||| || Sbjct 54523 CTTGTCTTG 54531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460513185143840