Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1906877 107 2e-18 seq1860899 107 2e-18 seq2114247 95.1 1e-14 seq3012833 91.5 1e-13 seq332360 91.5 1e-13 seq2519873 89.7 4e-13 seq1039624 89.7 4e-13 seq2496529 86.0 5e-12 seq2019908 86.0 5e-12 seq1707821 84.2 2e-11 >seq1906877 Length=16002 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 |||||||| ||||| |||||||| ||||| ||||| |||||| | || |||| | || Sbjct 14518 ATGCAAATCTTTGTGAAAACGCTGACGGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 14577 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | || || || || |||||||| || |||| ||| | Sbjct 14578 G--ACACCATTGATAACGTGAAGGCTAAGATCCAGGATAAAGAGGGGATCCCTCCTGACC 14635 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| ||| || || ||| | ||||||| || |||| ||||||| Sbjct 14636 AGCAGAGGCTGATTTTTGCTGGTAAGCAACTGGAAGATGGACGTACTCTGGCTGATTATA 14695 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || ||||||||| | ||| ||||| Sbjct 14696 ACATTCAGAAGGAGTCTACTCTGCATCTGGTG 14727 >seq1860899 Length=57535 Score = 107 bits (118), Expect = 2e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 |||||||| ||||| |||||||| ||||| ||||| |||||| | || |||| | || Sbjct 12773 ATGCAAATCTTTGTGAAAACGCTGACGGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 12832 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | || || || || |||||||| || |||| ||| | Sbjct 12833 G--ACACCATTGATAACGTGAAGGCTAAGATCCAGGATAAAGAGGGGATCCCTCCTGACC 12890 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| ||| || || ||| | ||||||| || |||| ||||||| Sbjct 12891 AGCAGAGGCTGATTTTTGCTGGTAAGCAACTGGAAGATGGACGTACTCTGGCTGATTATA 12950 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || ||||||||| | ||| ||||| Sbjct 12951 ACATTCAGAAGGAGTCTACTCTGCATCTGGTG 12982 >seq2114247 Length=2066 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| || ||||| ||||| || ||| | || |||| Sbjct 1754 ATGCAGATCTTTGTGAAAACCCTGACGGGGAAAACTATCACCTTGGAGGTGGAGAGTTCG 1695 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || |||||| ||||| || ||| |||| |||||| Sbjct 1694 GACACCATTGATAACGTGAAGGCTAAAATTCAGGATAAGGAGGGCATCCCTCCCGATCAG 1635 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || |||| ||| || || || || ||||||| || | || ||||||||| Sbjct 1634 CAGAGGCTGATTTTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTTGCTGATTATAAC 1575 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||||||| | ||| ||||| Sbjct 1574 ATTCAGAAGGAGTCTACTCTGCATCTGGTG 1545 >seq3012833 Length=100759 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| ||||| || ||||| || ||||| || ||||| ||| | Sbjct 36528 AATGCAAATCTTTGTGAAAACCCTGACGGGCAAGACCATCACGCTCGAAGTTGAGAGCTC 36587 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| || ||| | || || ||| || || || || || | || ||||| Sbjct 36588 CGATACGATTGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGGATTCCTCCGGATCA 36647 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | || | ||| || |||||| | ||||||| | || |||| || ||||| Sbjct 36648 GCAAAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTTTGGCGGACTATAA 36707 Query 115465 CATTCAAAAAGAGTCTAC 115482 |||||| ||||||||||| Sbjct 36708 CATTCAGAAAGAGTCTAC 36725 >seq332360 Length=523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| | ||||| ||||| || ||| | || |||| Sbjct 455 ATGCAGATCTTTGTGAAAACCTTGACGGGGAAAACTATCACCTTGGAGGTGGAGAGTTCG 396 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || |||||| ||||| || ||| |||| || ||| Sbjct 395 GACACCATTGATAACGTGAAGGCTAAAATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 336 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || |||| ||| || || || || ||||||| || |||| ||||||||| Sbjct 335 CAGAGGCTGATTTTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGGCTGATTATAAC 276 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||||||| | ||| ||||| Sbjct 275 ATTCAGAAGGAGTCTACTCTGCATCTGGTG 246 >seq2519873 Length=26497 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 ||||| || ||||| ||||| | ||||| ||||| |||||| | || |||| | || Sbjct 5307 ATGCAGATCTTTGTGAAAACTTTGACGGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 5366 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | || || ||||| ||||| || ||| |||| || | Sbjct 5367 G--ACACCATTGATAACGTGAAGGCTAAAATCCAGGATAAGGAGGGCATCCCTCCCGACC 5424 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| ||| || || || || ||||||| || | || ||||||| Sbjct 5425 AGCAGAGGCTGATTTTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTTGCTGATTATA 5484 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || ||||||||| | ||| ||||| Sbjct 5485 ACATTCAGAAGGAGTCTACTCTGCATCTGGTG 5516 >seq1039624 Length=3010 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| || || ||||||||||||||| | || |||| | Sbjct 1219 ATGCAGATCTTTGTGAAAACCCTTACTGGAAAAACCATTACCTTGGAGGTGGAGAGCTCA 1160 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || || || || || || ||| |||| || ||| Sbjct 1159 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 1100 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||||| || |||| ||| || || || | ||||||| || |||| ||||||||| Sbjct 1099 CAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACGCTGGCTGATTATAAC 1040 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| ||| | || ||||| | ||| | || || || Sbjct 1039 ATTCAGAAGGAGTCCACTCTGCACCTGGTGCTCAGACTTCGTGGTGG 993 >seq2496529 Length=4132 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| || ||||||||||| ||||| || || || || || |||| ||| | Sbjct 3932 AAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACAATCACTCTCGAGGTCGAGAGC 3991 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||||| || ||||| ||||| || || || || |||||| ||||| ||| Sbjct 3992 TCTGACACCATT-GACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCTGA 4050 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||||| | || || | ||| || || || | ||||||| | |||| | |||||||| Sbjct 4051 TCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACCCTTGCCGATTA 4110 Query 115462 TAACATTCAAAAAGAGTCTAC 115482 || || ||||| || || || Sbjct 4111 CAATATCCAAAAGGAATCCAC 4131 >seq2019908 Length=144052 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| || || ||||||||||||||| | || |||| | Sbjct 124493 ATGCAGATCTTTGTGAAAACCCTTACTGGAAAAACCATTACCTTGGAGGTGGAGAGCTCA 124434 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || || || || || || ||| |||| || ||| Sbjct 124433 GACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 124374 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||||| || |||| ||| || || || | ||||||| || |||| ||||||||| Sbjct 124373 CAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACGCTGGCTGATTATAAC 124314 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| ||| | || |||| | ||| | || || || Sbjct 124313 ATTCAGAAGGAGTCCACTCTGCACCTGGTTCTCAGACTTCGTGGTGG 124267 >seq1707821 Length=1521 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| ||||| || || || ||||| | |||| ||| | Sbjct 1461 ATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACGATTACTTTGGAAATTGAGAGCTCG 1402 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | ||||| || || || || || || |||||| ||||| ||| || Sbjct 1401 GACAC-CATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCA 1343 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || || || |||||||||| | |||| | || || ||||| Sbjct 1342 GCAGCGTCTGATCTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACCCTTGCTGACTATAA 1283 Query 115465 CATTCAAAAAGAGTCTACTATACAT 115489 || || || ||||| ||| | ||| Sbjct 1282 TATCCAGAAGGAGTCCACTCTGCAT 1258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409619622750640