Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq2065080 188 7e-43 >seq2065080 Length=53610 Score = 188 bits (208), Expect = 7e-43 Identities = 308/441 (70%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 138789 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 138848 ||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 138849 TTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 138908 ||| ||||| | | ||| || ||||| |||||||||||||||||| | ||||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 138909 GCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAA 138968 || || | || |||||| || ||||| |||||||||||||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 138969 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACG 139025 ||| ||| ||||||||| | |||| || || | ||| || | || ||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACG 24638 Query 139026 AATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA--- 139082 ||| || || ||||| |||||||| || | || ||| | ||||| || ||||| Sbjct 24639 AATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACT 24698 Query 139083 AGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACT 139142 ||| | || ||| ||||| | || ||| | ||||| | |||||| || || Sbjct 24699 AGCTGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCT 24755 Query 139143 AAACTGTCGAGTTGGAGTACGACAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCG 139202 ||| || | ||| ||||| | ||| |||||||| || ||||| | || || Sbjct 24756 AAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAA 24815 Query 139203 AGTAGATACTGCTTCATAAAA 139223 |||||| | || |||||||| Sbjct 24816 AGTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510596941852000