Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq2065080 178 1e-39 >seq2065080 Length=53610 Score = 178 bits (196), Expect = 1e-39 Identities = 271/386 (70%), Gaps = 0/386 (0%) Strand=Plus/Plus Query 141982 CCTTTGTTGTTTTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAA 142041 ||| | || ||||| ||||| | || ||| || ||||| |||||||||||||||||| | Sbjct 24451 CCTCTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAAC 24510 Query 142042 GCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAA 142101 ||||||||| || || | | ||||||||| || || |||||||||||||| || ||| Sbjct 24511 AGAGTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAA 24570 Query 142102 TGTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCT 142161 ||||| |||| || ||| ||| ||||| |||| || | |||| || || Sbjct 24571 TGTTTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCG 24630 Query 142162 TCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATT 142221 |||||||||| || || || || ||||| ||||| | || ||| | |||| | | Sbjct 24631 ACAGCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACT 24690 Query 142222 ATTGAGTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAA 142281 ||||| | || ||| |||||||| | | || | |||||| | |||||| Sbjct 24691 ATTGAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAA 24750 Query 142282 GAACTAAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAACC 142341 || |||||||| | ||| ||||| | | |||| |||||||| || || || | || | Sbjct 24751 GAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATT 24810 Query 142342 TGACGAGTACTTACAGCGTCATAAAA 142367 | |||| | |||||||||||| Sbjct 24811 CTAAAAGTAGAAATAGCGTCATAAAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524860406618960