Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq2065080 251 2e-62 >seq2065080 Length=53610 Score = 251 bits (278), Expect = 2e-62 Identities = 641/969 (66%), Gaps = 20/969 (2%) Strand=Plus/Minus Query 51857 ATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTTT 51916 ||| |||| || || |||||| ||| || ||| | | || | ||| |||||||| ||| Sbjct 23092 ATGACTTATACAACTTTTTCAAAAAAAAAAAATGATCCTTTGCAAGAACCAATGTTTTTT 23033 Query 51917 GGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTTA 51976 || || ||||| || | ||||||| ||||| || || || || || || ||| Sbjct 23032 GGACAACCAGTTAATATTTCCAGATATGATCAACAAAAATATATAATTTTTGAAAAATTA 22973 Query 51977 ATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCGT 52036 || || |||||| | || || || ||| |||| ||||| |||| | || | || || Sbjct 22972 ATAGAAAAACAACTTTCTTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGA 22913 Query 52037 ATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTAT 52096 || |||| | | || | || | | ||| |||||||||| |||||| | ||| Sbjct 22912 ATAGATTTTAACAATTTGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATAT 22853 Query 52097 CAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGTG 52156 || | | || || |||||||| ||| | | || || | || ||| | || | || Sbjct 22852 CAAACCTTACTAGATTCAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTA 22793 Query 52157 AGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTCA 52216 || |||||||| || || ||||||||||| ||||| || || || ||||| ||||| Sbjct 22792 TCAATACCTGAATTAGAAACATGGATTGAAACTTGGTCATTTTCTGAAACTATACATTCT 22733 Query 52217 CGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATT-ATCTTTGATGA 52275 || |||||||| || || ||||| || | | | | | | |||| || ||||| || Sbjct 22732 CGATCTTATACTCATATAATTCGAAACA-TAACAAATAATCCTTCATTAATATTTGAAGA 22674 Query 52276 AATCGTAACTAACGAA--CACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGAC 52333 || ||| |||| || | ||| | |||||| | || || ||||| || Sbjct 22673 TATTATAAATAACCAATCAATATCTA--ATAGAGCAAAAGATATTTCTTTTTATTACGAT 22616 Query 52334 GAACTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGCCA------TGCT 52387 || | ||| || | ||||| || || |||||||| | || | | Sbjct 22615 GATTTTATTCAATATACAAGTTATTGGCATTTATTAGGAGAAGGAATTCAACAAATTAAT 22556 Query 52388 GGTCATGAA------ATTAGTCTGCGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCATG 52441 ||| || |||| | | | ||||| || || | ||| | || | ||| Sbjct 22555 AATCAAAAAAAAATTATTAATTTAAATTGTTTGAAAAAAAAATTATATCTCTGTTTAATG 22496 Query 52442 TCTATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTC 52501 | ||||| || ||||| ||| | || |||||||| ||||||||||||||||| || Sbjct 22495 AGCGTAAATGCTTTAGAAGCTATTAGATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTT 22436 Query 52502 GCAGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGAA 52561 || ||| | | | |||||||||||||| || || ||||| ||||| ||| |||||||| Sbjct 22435 GCTGAAAGAGAAATTATGGAAGGAAATGCAAAAATCATTCGATTAATAGCAAGAGATGAA 22376 Query 52562 GCACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGTGGAA-AAGATGA 52620 ||| | ||||| || | ||||| || || | || || || ||| || || || | Sbjct 22375 GCATTACATTTAACTAGTACTCAACATATAATTAATATT-TTACAAAACAAAGAAAATAA 22317 Query 52621 CCCAGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGA 52680 | | |||| | | ||| || |||||| | ||| | ||| | || | | Sbjct 22316 TGAAAATATGGCTAATATTACTAAAGAATGCAAAGATGAAAGTTTTAAAATTTTTTTAAA 22257 Query 52681 TGCTGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGATTGG 52740 |||||| |||||||||| | ||||| || ||||| || ||||| |||||| | || Sbjct 22256 CGCTGCTGAACAAGAGAAAAAATGGGCTGAATATTTATTTTCTGATGGTTCTATGCTAGG 22197 Query 52741 CTTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCAAGC 52800 ||||| || ||||| |||| |||| | |||||||| || || || | |||||||| Sbjct 22196 ATTAAATAAAGAAATTTTATGTCAATATATTGAATATATTACAAACATCAGAATGCAAGC 22137 Query 52801 AGTTGGATT 52809 ||| || || Sbjct 22136 AGTGGGTTT 22128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163296551264868