Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2503618 105 6e-18
seq2365482 105 6e-18
seq1522372 102 8e-17
seq1033036 102 8e-17
seq2416635 98.7 9e-16
seq1870220 96.9 3e-15
seq933519 96.9 3e-15
seq2723061 91.5 1e-13
seq2242544 89.7 5e-13
>seq2503618
Length=99574
Score = 105 bits (116), Expect = 6e-18
Identities = 219/325 (67%), Gaps = 2/325 (1%)
Strand=Plus/Plus
Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099
|||||| || || | ||||| | ||| || | ||| || || |||||||| ||||
Sbjct 77038 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGCACATCCA 77095
Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159
| || | || || ||| | |||| ||||| | | || | || || || || ||||
Sbjct 77096 ATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCAATATGTTGATCAAGGTG 77155
Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219
| || | |||||||||||| || || | || | ||||| || || || || || |
Sbjct 77156 GAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGAGCCATGTCATGCAGATGTTTTTG 77215
Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279
|| | || || | |||||||| || || || | ||||| | || || || |
Sbjct 77216 AGTTTCTGGAGTTGAGGAAGAACCATGGGAAGGAATAAAACAGGGCATGTGATCTGTTTT 77275
Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339
|| || ||||||||||| || ||||||||| | ||| || | || | | ||| |
Sbjct 77276 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGTCCAGGAGAATTATACATGGTCAC 77335
Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364
| |||||||||||||||| ||| ||
Sbjct 77336 TGTTTTGTCCCAATGAATCTCCTGG 77360
>seq2365482
Length=15309
Score = 105 bits (116), Expect = 6e-18
Identities = 195/285 (68%), Gaps = 1/285 (0%)
Strand=Plus/Plus
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || || |||||||| ||||| || | || || ||| | |||| ||||| | |
Sbjct 282 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 341
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| | || || || || ||||| || | |||||||||| | || || | || | ||
Sbjct 342 TGCTCAATATGTTGATCACGGTGGAGGCAAGAGGAAGGGTGCCTTTGCCATGTACTTAGA 401
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|| ||||| || || | | |||| | || || | |||||||| || || ||
Sbjct 402 TCCATGGCATGCAGATTTTTTGAGTTTC-TAGAGTTGAGGAAGAACCATGGGAAGGAAGA 460
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| ||||| | || || || | || || ||||||||||| || ||||||||| | ||
Sbjct 461 AAACAGGGCATGTGATCTATTTTTTGCACTTTGGGTGCCAGAACTCTTTATGAAAAGGGT 520
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361
| |||| || || | ||| | |||||||||||||||| |||
Sbjct 521 CCAGAAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCC 565
>seq1522372
Length=1257
Score = 102 bits (112), Expect = 8e-17
Identities = 196/288 (68%), Gaps = 1/288 (0%)
Strand=Plus/Minus
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || || |||||||| ||||| || | || || ||| | |||| ||||| | |
Sbjct 534 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 475
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| || || || || || || || || | |||||||||||| || || | || | ||
Sbjct 474 TGCTCGATATGTTGATCAAGGCGGCGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGA 415
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|| ||||| || || | | |||| | || || | |||||||| || || ||
Sbjct 414 TCCATGGCATGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 356
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| ||||| | || || || | || || ||||||||||| || ||||||||| | ||
Sbjct 355 AAACAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGT 296
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
| || | || || ||| | |||||||||||||||| ||| ||
Sbjct 295 CTAGGAGAATTCTAAATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 248
>seq1033036
Length=1205
Score = 102 bits (112), Expect = 8e-17
Identities = 196/288 (68%), Gaps = 1/288 (0%)
Strand=Plus/Minus
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || || |||||||| ||||| || | || || ||| | |||| ||||| | |
Sbjct 1045 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 986
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| || || ||||| || ||||| || | |||||||||||| || || | || | ||
Sbjct 985 TGCTCGATATGTGGATCAAGGTGGAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGA 926
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|| ||||| || || | | |||| | || || | |||||||| || || ||
Sbjct 925 TCCATGGCATGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 867
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| ||||| | || | || | | || ||||||||| | || ||||||||| | ||
Sbjct 866 AAACAGGGCATGTGATATGTTTTTTGTGCTTTGGGTGCCAAAACTCTTTATGAAAAGGGT 807
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
| || | || || | ||| | |||||||||||||||| ||| ||
Sbjct 806 CCAGGAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 759
>seq2416635
Length=260445
Score = 98.7 bits (108), Expect = 9e-16
Identities = 218/325 (67%), Gaps = 3/325 (1%)
Strand=Plus/Minus
Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099
|||||| || || | ||||| | ||| || | ||| || || ||||| || ||||
Sbjct 258800 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGGACATCCA 258743
Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159
| || | || | ||| | |||| ||||| | | || || || || ||||| ||||
Sbjct 258742 ATGGTATTGTGACAATGTTGAGGGTATTCAATGATACTGCTCGATATGTTGACCAAGGTG 258683
Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219
| || | |||||||| | | || || | || | || || ||||| || || | |
Sbjct 258682 GAGGCAAGAGGAAGGCTGCCTTTGCCATGTACTTAGATCCATGGCATGCAGATTTTTTGA 258623
Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279
|||| | || || | |||||||| || || || | ||||| | || || || |
Sbjct 258622 GTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAATAGGGCATGTGATCTGTTTT 258564
Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339
|| || ||||||||||| || ||||||||| | ||| || | || || | |||
Sbjct 258563 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGTCCAGGAGAATTCTACATGGTCAT 258504
Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364
| |||||||||||||||| ||| ||
Sbjct 258503 TGTTTTGTCCCAATGAATCTCCTGG 258479
>seq1870220
Length=168078
Score = 96.9 bits (106), Expect = 3e-15
Identities = 196/290 (68%), Gaps = 1/290 (0%)
Strand=Plus/Plus
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|| ||||| || || |||||||| ||||| || | || || ||| | |||| |||||
Sbjct 42489 TATATCCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAAT 42548
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
| | || || || || || || ||||| || | |||||| ||| | || || | ||
Sbjct 42549 GATACTGCTCGATATGTTGATCAAGGTGGAGGCAAGAGGAAAGGTGCCTTTGCCATGTAC 42608
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
| || || ||||| | || | | |||| | || || | |||||||| || ||
Sbjct 42609 TTAGATCCATGGCATGTAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAG 42667
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | ||||| | || || || | || || ||||||||||| || |||||||||
Sbjct 42668 GAAGAAAATAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTGCCAGAACTCTTTATGAAA 42727
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361
| || || | || || | ||| | |||||||||||||||| |||
Sbjct 42728 AGGATCCAGGAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCC 42777
>seq933519
Length=1040
Score = 96.9 bits (106), Expect = 3e-15
Identities = 195/288 (68%), Gaps = 1/288 (0%)
Strand=Plus/Minus
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || || |||||||| ||||| || | || || ||| | |||| ||||| |
Sbjct 1032 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAT 973
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| || || || || || ||||| || | |||||||||||| || || | || | |
Sbjct 972 TGCTCGATATGTTGATCAAGGTGGAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTATA 913
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|| ||||| || || | |||| | || || | |||||||| || || ||
Sbjct 912 TCCATGGCATGCAGATTGTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 854
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| ||||| | || || || | || || ||||| ||||| || ||||||||| | ||
Sbjct 853 AAACAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTACCAGAACTCTTTATGAAAAGGGT 794
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
| || | || || | ||| | | |||||||||||||||| ||| ||
Sbjct 793 CCAGGAGAATTCTACATGGTGATTGTTTTGTCCCAATGAATCTCCTGG 746
>seq2723061
Length=1725
Score = 91.5 bits (100), Expect = 1e-13
Identities = 190/279 (68%), Gaps = 3/279 (1%)
Strand=Plus/Minus
Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146
|||||||| ||||| || | || || ||| | |||| ||||| | | || || ||
Sbjct 304 AATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCGATAT 245
Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGT-TCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
|| || || ||||| || | |||||||||| ||||| || || | || || |||||
Sbjct 244 GTTGATCAAGGTGGAGGCAAGAGGAAGGGTGTCTTT-GCCAAGTACTTAGATCCATGGCA 186
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
|| || | | |||| | || || | |||||||| || || || | |||||
Sbjct 185 TGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAACAGGGC 127
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| || || || | || || ||||||||| | || ||||||||| | ||| || | ||
Sbjct 126 ATGTGATCTGTTTTTTGCGCTTTGGGTGCCATAACTCTTTATGAAAAGGGTCCAGGAGAA 67
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
|| | ||| | |||||||||||||||| ||| ||
Sbjct 66 TTCTACATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 28
>seq2242544
Length=4788
Score = 89.7 bits (98), Expect = 5e-13
Identities = 216/325 (66%), Gaps = 3/325 (1%)
Strand=Plus/Plus
Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099
|||||| || || | ||||| | ||| || | ||| || || |||||||| ||||
Sbjct 2022 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGCACATCCA 2079
Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159
| || | || || ||| | |||| ||||| | | || || || || || || ||||
Sbjct 2080 ATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCGATATGTTGATCAAGGTG 2139
Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219
| || | ||| |||||| | || | | || | || || ||||| || || | |
Sbjct 2140 GAGGAAAGAGTAAGGGTGCCTTTTCCATGTAATTAGATCCATGGCATGCAGATTTTTTGA 2199
Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279
|||| | || || | |||||||| || || || | ||||| | || || || |
Sbjct 2200 GTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAATAGGGCATGTGATCTGTTTT 2258
Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339
|| || ||||||||||| || ||||||||| | || || | || || | |||
Sbjct 2259 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGTTCCAGGAGAATTCTACATGGTCAT 2318
Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364
| |||||||| ||||||| ||| ||
Sbjct 2319 TGTTTTGTCCTAATGAATCTCCTGG 2343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475965015419120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |