Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2503618 105 6e-18 seq2365482 105 6e-18 seq1522372 102 8e-17 seq1033036 102 8e-17 seq2416635 98.7 9e-16 seq1870220 96.9 3e-15 seq933519 96.9 3e-15 seq2723061 91.5 1e-13 seq2242544 89.7 5e-13 >seq2503618 Length=99574 Score = 105 bits (116), Expect = 6e-18 Identities = 219/325 (67%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099 |||||| || || | ||||| | ||| || | ||| || || |||||||| |||| Sbjct 77038 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGCACATCCA 77095 Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159 | || | || || ||| | |||| ||||| | | || | || || || || |||| Sbjct 77096 ATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCAATATGTTGATCAAGGTG 77155 Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219 | || | |||||||||||| || || | || | ||||| || || || || || | Sbjct 77156 GAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGAGCCATGTCATGCAGATGTTTTTG 77215 Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279 || | || || | |||||||| || || || | ||||| | || || || | Sbjct 77216 AGTTTCTGGAGTTGAGGAAGAACCATGGGAAGGAATAAAACAGGGCATGTGATCTGTTTT 77275 Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339 || || ||||||||||| || ||||||||| | ||| || | || | | ||| | Sbjct 77276 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGTCCAGGAGAATTATACATGGTCAC 77335 Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364 | |||||||||||||||| ||| || Sbjct 77336 TGTTTTGTCCCAATGAATCTCCTGG 77360 >seq2365482 Length=15309 Score = 105 bits (116), Expect = 6e-18 Identities = 195/285 (68%), Gaps = 1/285 (0%) Strand=Plus/Plus Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||| || || |||||||| ||||| || | || || ||| | |||| ||||| | | Sbjct 282 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 341 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || | || || || || ||||| || | |||||||||| | || || | || | || Sbjct 342 TGCTCAATATGTTGATCACGGTGGAGGCAAGAGGAAGGGTGCCTTTGCCATGTACTTAGA 401 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || ||||| || || | | |||| | || || | |||||||| || || || Sbjct 402 TCCATGGCATGCAGATTTTTTGAGTTTC-TAGAGTTGAGGAAGAACCATGGGAAGGAAGA 460 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 | ||||| | || || || | || || ||||||||||| || ||||||||| | || Sbjct 461 AAACAGGGCATGTGATCTATTTTTTGCACTTTGGGTGCCAGAACTCTTTATGAAAAGGGT 520 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361 | |||| || || | ||| | |||||||||||||||| ||| Sbjct 521 CCAGAAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCC 565 >seq1522372 Length=1257 Score = 102 bits (112), Expect = 8e-17 Identities = 196/288 (68%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||| || || |||||||| ||||| || | || || ||| | |||| ||||| | | Sbjct 534 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 475 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || || || || || || || || | |||||||||||| || || | || | || Sbjct 474 TGCTCGATATGTTGATCAAGGCGGCGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGA 415 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || ||||| || || | | |||| | || || | |||||||| || || || Sbjct 414 TCCATGGCATGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 356 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 | ||||| | || || || | || || ||||||||||| || ||||||||| | || Sbjct 355 AAACAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGT 296 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 | || | || || ||| | |||||||||||||||| ||| || Sbjct 295 CTAGGAGAATTCTAAATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 248 >seq1033036 Length=1205 Score = 102 bits (112), Expect = 8e-17 Identities = 196/288 (68%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||| || || |||||||| ||||| || | || || ||| | |||| ||||| | | Sbjct 1045 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAC 986 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || || ||||| || ||||| || | |||||||||||| || || | || | || Sbjct 985 TGCTCGATATGTGGATCAAGGTGGAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGA 926 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || ||||| || || | | |||| | || || | |||||||| || || || Sbjct 925 TCCATGGCATGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 867 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 | ||||| | || | || | | || ||||||||| | || ||||||||| | || Sbjct 866 AAACAGGGCATGTGATATGTTTTTTGTGCTTTGGGTGCCAAAACTCTTTATGAAAAGGGT 807 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 | || | || || | ||| | |||||||||||||||| ||| || Sbjct 806 CCAGGAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 759 >seq2416635 Length=260445 Score = 98.7 bits (108), Expect = 9e-16 Identities = 218/325 (67%), Gaps = 3/325 (1%) Strand=Plus/Minus Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099 |||||| || || | ||||| | ||| || | ||| || || ||||| || |||| Sbjct 258800 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGGACATCCA 258743 Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159 | || | || | ||| | |||| ||||| | | || || || || ||||| |||| Sbjct 258742 ATGGTATTGTGACAATGTTGAGGGTATTCAATGATACTGCTCGATATGTTGACCAAGGTG 258683 Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219 | || | |||||||| | | || || | || | || || ||||| || || | | Sbjct 258682 GAGGCAAGAGGAAGGCTGCCTTTGCCATGTACTTAGATCCATGGCATGCAGATTTTTTGA 258623 Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279 |||| | || || | |||||||| || || || | ||||| | || || || | Sbjct 258622 GTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAATAGGGCATGTGATCTGTTTT 258564 Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339 || || ||||||||||| || ||||||||| | ||| || | || || | ||| Sbjct 258563 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGTCCAGGAGAATTCTACATGGTCAT 258504 Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364 | |||||||||||||||| ||| || Sbjct 258503 TGTTTTGTCCCAATGAATCTCCTGG 258479 >seq1870220 Length=168078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 196/290 (68%), Gaps = 1/290 (0%) Strand=Plus/Plus Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || ||||| || || |||||||| ||||| || | || || ||| | |||| ||||| Sbjct 42489 TATATCCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAAT 42548 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | || || || || || || ||||| || | |||||| ||| | || || | || Sbjct 42549 GATACTGCTCGATATGTTGATCAAGGTGGAGGCAAGAGGAAAGGTGCCTTTGCCATGTAC 42608 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | || || ||||| | || | | |||| | || || | |||||||| || || Sbjct 42609 TTAGATCCATGGCATGTAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAG 42667 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | ||||| | || || || | || || ||||||||||| || ||||||||| Sbjct 42668 GAAGAAAATAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTGCCAGAACTCTTTATGAAA 42727 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361 | || || | || || | ||| | |||||||||||||||| ||| Sbjct 42728 AGGATCCAGGAGAATTCTACATGGTCATTGTTTTGTCCCAATGAATCTCC 42777 >seq933519 Length=1040 Score = 96.9 bits (106), Expect = 3e-15 Identities = 195/288 (68%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||| || || |||||||| ||||| || | || || ||| | |||| ||||| | Sbjct 1032 CCGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATAT 973 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || || || || || ||||| || | |||||||||||| || || | || | | Sbjct 972 TGCTCGATATGTTGATCAAGGTGGAGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTATA 913 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 || ||||| || || | |||| | || || | |||||||| || || || Sbjct 912 TCCATGGCATGCAGATTGTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGA 854 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 | ||||| | || || || | || || ||||| ||||| || ||||||||| | || Sbjct 853 AAACAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTACCAGAACTCTTTATGAAAAGGGT 794 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 | || | || || | ||| | | |||||||||||||||| ||| || Sbjct 793 CCAGGAGAATTCTACATGGTGATTGTTTTGTCCCAATGAATCTCCTGG 746 >seq2723061 Length=1725 Score = 91.5 bits (100), Expect = 1e-13 Identities = 190/279 (68%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 |||||||| ||||| || | || || ||| | |||| ||||| | | || || || Sbjct 304 AATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCGATAT 245 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGT-TCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205 || || || ||||| || | |||||||||| ||||| || || | || || ||||| Sbjct 244 GTTGATCAAGGTGGAGGCAAGAGGAAGGGTGTCTTT-GCCAAGTACTTAGATCCATGGCA 186 Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265 || || | | |||| | || || | |||||||| || || || | ||||| Sbjct 185 TGCAGATTTTTTGAGTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAACAGGGC 127 Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325 | || || || | || || ||||||||| | || ||||||||| | ||| || | || Sbjct 126 ATGTGATCTGTTTTTTGCGCTTTGGGTGCCATAACTCTTTATGAAAAGGGTCCAGGAGAA 67 Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364 || | ||| | |||||||||||||||| ||| || Sbjct 66 TTCTACATGGTCATTGTTTTGTCCCAATGAATCTCCTGG 28 >seq2242544 Length=4788 Score = 89.7 bits (98), Expect = 5e-13 Identities = 216/325 (66%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 94040 TCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCA 94099 |||||| || || | ||||| | ||| || | ||| || || |||||||| |||| Sbjct 2022 TCAGTG--CATAACATTCGTGCAACTGGTATTTATACCCGAGGAACAAATGGCACATCCA 2079 Query 94100 ACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTG 94159 | || | || || ||| | |||| ||||| | | || || || || || || |||| Sbjct 2080 ATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACTGCTCGATATGTTGATCAAGGTG 2139 Query 94160 GTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG 94219 | || | ||| |||||| | || | | || | || || ||||| || || | | Sbjct 2140 GAGGAAAGAGTAAGGGTGCCTTTTCCATGTAATTAGATCCATGGCATGCAGATTTTTTGA 2199 Query 94220 CTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCT 94279 |||| | || || | |||||||| || || || | ||||| | || || || | Sbjct 2200 GTTTC-TGGAGTTGAGGAAGAACCATGGGAAGGAAGAAAATAGGGCATGTGATCTGTTTT 2258 Query 94280 ACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTC 94339 || || ||||||||||| || ||||||||| | || || | || || | ||| Sbjct 2259 TTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGTTCCAGGAGAATTCTACATGGTCAT 2318 Query 94340 TTTTTTGTCCCAATGAATGTCCCGG 94364 | |||||||| ||||||| ||| || Sbjct 2319 TGTTTTGTCCTAATGAATCTCCTGG 2343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475965015419120