Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_012635.1 Length=168394 Score E Sequences producing significant alignments: (Bits) Value seq2065080 206 3e-48 seq2062996 86.0 6e-12 >seq2065080 Length=53610 Score = 206 bits (228), Expect = 3e-48 Identities = 323/461 (70%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 140724 ATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATT 140783 ||| | ||| | | | ||||| | ||| | | || || ||||||| ||| | ||||| Sbjct 24402 ATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATT 24461 Query 140784 TTTCAAAACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 140843 ||| ||||| | | ||| || ||||| |||||||||||||||||| | ||||||||| Sbjct 24462 TTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGC 24521 Query 140844 GCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAA 140903 || || | || |||||| || ||||| |||||||||||||| ||||||||||| | || Sbjct 24522 ACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAA 24581 Query 140904 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAAT 140963 ||| ||| ||||||||| | |||| || | ||| | || |||||||||| Sbjct 24582 AGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGAAT 24641 Query 140964 CATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGA---AGC 141020 || || ||||| |||||||| || | || ||| | ||||| || ||||| ||| Sbjct 24642 TTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGC 24701 Query 141021 GGAAGCCTTATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACGCATGAACTAAA 141080 | || ||| ||||| | ||| |||| | ||||| | ||| || || ||||| Sbjct 24702 TGTTGC---ATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758 Query 141081 CTGCCGAGTTGGAGTACGGCAACCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGT 141140 |||| ||| ||||| | ||| |||||||| || ||||||| || || ||| Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGT 24818 Query 141141 AGATACCGCTTCATAAAAACGGATAACATGTTTTAATCTAT 141181 ||| | || |||||||| ||| || | |||||||| Sbjct 24819 AGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTAT 24859 >seq2062996 Length=51343 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 142575 GCATATGATGCAATATTAAATGGAAGACCGAGGAAAACATCTACCGAACGTTGATACCAC 142634 ||||| ||| |||||||| || | || | |||| ||| ||||||||||| Sbjct 23048 GCATAGCTTGCTATATTAAAAGGTAATCCTATAAAAATATCACTAGAACGTTGATAAATT 23107 Query 142635 TGA-AGGTCAAGGTATCCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAA 142693 ||| || | || |||| ||| | | || ||| ||| | || | ||||||||| ||||| Sbjct 23108 TGACAGCTTAAAGTATTGTTTA-GTATATAAAATTGAAATAATACATGACAAGGTGGTAA 23166 Query 142694 TGCCATATATTTAAGTTCAGCTGGATTCCACGCAGAAACAATTTGACGCCTATCATTTGG 142753 |||||| | |||| ||| | |||||| ||||||||||| | ||| ||| || Sbjct 23167 TGCCATTTTGTTAATTTCGCTTACATTCCAAGCAGAAACAATAATTCTTCTAGAATTAGG 23226 Query 142754 CAGTTTTTTAATACGATCAATAACTTCTATAATTTGATCTA 142794 |||||||| ||| || || | | |||||||||||| Sbjct 23227 ATTATTTTTAATTTCATCTATTACATTTTTAATTTGATCTA 23267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518305924320480