Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_012638.1 Length=165429 Score E Sequences producing significant alignments: (Bits) Value seq2065080 192 6e-44 >seq2065080 Length=53610 Score = 192 bits (212), Expect = 6e-44 Identities = 313/448 (70%), Gaps = 12/448 (3%) Strand=Plus/Plus Query 138402 TAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 138461 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 138462 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 138521 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 138522 CCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 138581 || || || || |||||||||||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 138582 TGGCGTACTTCACCCATGCCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 138638 || | |||| || || | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCC---TCCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 138639 ATACCAATTCCAGCACGTTTAGAGATATATTCAACAATTGA---AGCGGAAGCCTTATTG 138695 || |||||||| || | || ||| | ||||| || ||||| ||| | || ||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGC---ATTA 24711 Query 138696 ATAGACTTCAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTGCCGAGTTGGA 138755 ||||| | || |||| | ||||| | |||||| || ||||| |||| ||| ||| Sbjct 24712 ATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGA 24771 Query 138756 GTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCTGTCGAGTAGATACTGCTTCA 138815 || | ||| |||||||| || ||||| | || || |||||| | || ||| Sbjct 24772 GTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCA 24831 Query 138816 TAAAAACGGATAACATGTTTTAATCTAT 138843 ||||| ||| || | |||||||| Sbjct 24832 TAAAATTTTTTAATATAATCTAATCTAT 24859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509177676309680