Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq2065080 136 4e-27 >seq2065080 Length=53610 Score = 136 bits (150), Expect = 4e-27 Identities = 279/412 (68%), Gaps = 2/412 (0%) Strand=Plus/Plus Query 139685 TTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTG 139744 |||||||| |||| ||||||| | ||| | | || |||||||| | || |||| Sbjct 24400 TTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTA 24459 Query 139745 TTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCC 139804 || ||||| || | || | | || | ||||||||||| || || ||| | ||||| || Sbjct 24460 TTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCA 24519 Query 139805 GCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAG 139864 || || || | || || ||||| ||||| || ||||| || || ||||||||||| || Sbjct 24520 GCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAG 24579 Query 139865 AATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGA 139924 || || ||| ||||||||| |||| || | || | ||| | || ||| Sbjct 24580 AAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCACGA 24639 Query 139925 ATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTA-ATATACTTGATGATTGCATT 139983 || || | || || || || || || | ||| | | ||| || | |||| | | Sbjct 24640 ATTTGCCCTACATTAATTCCAATTCCTGCTC-TTTGAGATACATATTTTACTATTGAACT 24698 Query 139984 TGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACACGAACTAAA 140043 |||||| | || || | || ||| ||| ||| || | ||||| || ||||| Sbjct 24699 AGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAA 24758 Query 140044 TTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGATT 140095 ||| | || || || | ||||||||||||||||| || |||||||| ||| Sbjct 24759 TTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATT 24810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512222478091360