Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq2065080 192 6e-44 >seq2065080 Length=53610 Score = 192 bits (212), Expect = 6e-44 Identities = 303/434 (70%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 41061 TTTTATAACGCAATTTCCGATCGCAAACTGTCTCTACCGACTCCAATTATGGCGGGTGTA 41120 |||||| |||| ||||| | | | | |||||||| || || |||||||| |||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 41121 CGTACTCCTACGCGCCAGTTCTCCAGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGGT 41180 | |||||||| | || || | |||||| ||||||||| | |||| | | | | Sbjct 24776 AGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTAGAT 24717 Query 41181 TCTCTTAACGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGTATTGGG 41240 ||| |||| || | | | | || || || ||| | || ||| | || || ||||| Sbjct 24716 TCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATTGGA 24657 Query 41241 GTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCAT 41300 |||| | || || ||||| || | || | || | || || ||||| ||||| Sbjct 24656 ATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTTCAT 24597 Query 41301 ACTGGTGTGATTCCTTTCTGGAAACATATCCAAACCGCTGTTAAATCCTGTTCACAGGGT 41360 |||||| || ||||||| |||||| | ||||| |||||||||||||| || || ||| Sbjct 24596 ACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCAAGGT 24537 Query 41361 GGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAAC 41420 || ||| | || |||||||| || |||| ||||||| | |||||| | ||||| || || Sbjct 24536 GGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGAGAAT 24477 Query 41421 CTTCTGGTGTTGAAGAACAACAAAGGCGTAGAAGAAAACCGCGTTCGTCATCTTGATTAC 41480 | | || || || || || | ||| ||||||| || || || | ||| | |||||| Sbjct 24476 TTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTAGATTAC 24417 Query 41481 GGTGTACAGCTTAA 41494 | | |||| |||| Sbjct 24416 GCTATACAAATTAA 24403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 42892 AAAAACAACTTTCTTTCTTCTGGCGTCCGGAAGAAGTCGATCTGTCTACTGACCGTATGC 42951 |||||||||||||||| || ||| | || |||||| | ||| | |||| || || || Sbjct 22968 AAAAACAACTTTCTTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAG 22909 Query 42952 AGTATGCAAAACTTCCTGAACATGAAAAAATCATTTTCGATTCTAACCTACAGTATCAAA 43011 | | | || | || ||||||||||| |||||| ||| || | ||||||| Sbjct 22908 ATTTTAACAATTTGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAA 22849 Query 43012 CCCTGTTAGATACCATTCAGGGACGTGGGCCTAACCTCGCATTTTTGCCAATTGCATC-C 43070 || | ||||| | ||||| ||| | | || || | || |||||||| ||| ||| Sbjct 22848 CCTTACTAGATTCAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATCAA 22789 Query 43071 GATGTGAGCATGGAAACCTGGATCGAAACGTGGGCGTTTAGTGAAACCATCCA 43123 | ||| | ||||| ||||| ||||| ||| | ||| |||||| || || Sbjct 22788 TACCTGA-ATTAGAAACATGGATTGAAACTTGGTCATTTTCTGAAACTATACA 22737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536907231059520