Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq2065080 122 9e-23 >seq2065080 Length=53610 Score = 122 bits (134), Expect = 9e-23 Identities = 301/453 (66%), Gaps = 3/453 (1%) Strand=Plus/Plus Query 141444 ATAAGTAACTCATTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACA 141503 |||| ||| | ||| ||||| | | ||||| | || | | || || ||||| | Sbjct 24392 ATAA-TAATTTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATT 24450 Query 141504 CCTTTGTTGTTCTTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAAC 141563 ||| | || || || || || | ||| || || ||||| | ||||| ||||| | ||| Sbjct 24451 CCTCTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAAC 24510 Query 141564 ATTGTTGCCGAACCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAG 141623 | || || | |||| | || ||||||||||| ||| | | ||| || | | ||| Sbjct 24511 AGAGTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAA 24570 Query 141624 TGCTTCCAGAAAGGTACTAC-GCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACC 141682 || || ||||||||| ||| ||||| || |||| ||| | ||| || Sbjct 24571 TGTTTGTAGAAAGGTA-TACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCC 24629 Query 141683 TTCAGCTCGAATCATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAAC 141742 |||| ||||| ||| | ||||| || || ||||||| | ||| ||||| || || Sbjct 24630 GACAGCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTAC 24689 Query 141743 AATAGCAGAGTTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACA 141802 || | | || |||| || || || | | ||| || ||||||| | ||||| Sbjct 24690 TATTGAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACA 24749 Query 141803 TGAACTGAATTGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGAT 141862 || || ||||| | ||| || || | ||||| |||||||| || || || | || || Sbjct 24750 AGAGCTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATAT 24809 Query 141863 TTTACGAGTTGAAACAGCTTCATAAAATTCTTT 141895 | || ||| |||| ||| |||||||||| ||| Sbjct 24810 TCTAAAAGTAGAAATAGCGTCATAAAATTTTTT 24842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505064577037360