Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2049698 138 1e-27 seq1869705 95.1 1e-14 >seq2049698 Length=133754 Score = 138 bits (152), Expect = 1e-27 Identities = 304/446 (68%), Gaps = 10/446 (2%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| || |||||||| | | || ||||||| |||||| | | || ||||| || Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237 Query 15947 GATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAA 16005 || |||| ||||| || ||| | |||||||||||||| ||||| | |||||| || | Sbjct 11238 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 11296 Query 16006 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064 |||||||| || |||||||| || | || |||| | | ||| | || || Sbjct 11297 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 11355 Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 |||||||| ||||| | ||| || ||||| || |||||| || || || || Sbjct 11356 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 11415 Query 16125 TCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 || || ||| || | || || | ||| ||||||||||| ||||| | | | | | Sbjct 11416 TCACG--CACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AG 11472 Query 16183 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 || | || |||||| ||| || ||| || |||||||| ||| || | |||||| || Sbjct 11473 ATAGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCA 11532 Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTAT 16301 || ||||| |||| | || || | ||| ||||| || ||| || || | Sbjct 11533 GTCCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAAC 11592 Query 16302 CTCTCAGGTTGCTTAAGAAAATCCAC 16327 ||||| |||| ||| || || || || Sbjct 11593 CTCTCTGGTTTCTTCAGGAACTCAAC 11618 >seq1869705 Length=65823 Score = 95.1 bits (104), Expect = 1e-14 Identities = 191/277 (69%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 15897 CCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACA 15956 || || ||||| | || |||| || | |||||| ||||| || || |||||||||| Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164 Query 15957 ATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTC 16015 | || || ||| | ||||| ||||||||||| || | | ||||| | || ||||| Sbjct 20165 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 20223 Query 16016 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 16072 ||||||||||| || |||| || || | | ||| ||||||| ||||| | Sbjct 20224 TCGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAG 20280 Query 16073 CTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTA 16131 ||||| ||||| | || || ||| |||||| | | ||| ||| ||||| || | Sbjct 20281 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAA-AGATCACGAA 20339 Query 16132 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 | | ||| || || || ||||||||||| | ||| Sbjct 20340 CCCTAGAGGCTCCTACTCCTACAAACATCTCTATAAA 20376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597206005271840