Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2049698 131 2e-25
seq1869705 125 8e-24
seq2002493 102 9e-17
seq2074987 86.0 7e-12
seq1994730 86.0 7e-12
seq1886602 86.0 7e-12
seq1429029 84.2 2e-11
>seq2049698
Length=133754
Score = 131 bits (144), Expect = 2e-25
Identities = 300/444 (68%), Gaps = 6/444 (1%)
Strand=Plus/Plus
Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253
|||||| || ||||| || | | || ||||||| |||||| | | || || || ||
Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237
Query 9254 GATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312
|| |||| ||||| || ||| | |||||||||||||| ||||| | ||| || || |
Sbjct 11238 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 11296
Query 9313 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 9371
|||||||| || |||||||| || | || |||| | | ||| | || ||
Sbjct 11297 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 11355
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
|||||||| ||||| | ||| ||||| || || |||||| ||| ||| || ||
Sbjct 11356 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 11415
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491
|| || || || || || | ||| ||||||||||| ||||| | | | | | ||
Sbjct 11416 TCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AGAT 11474
Query 9492 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
| || |||||| ||| || ||| || |||||||| ||| || | |||||| || ||
Sbjct 11475 AGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAGT 11534
Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610
||||| |||| | || || | || ||||| || ||| || || | ||
Sbjct 11535 CCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAACCT 11594
Query 9611 CTCAGGTTGCTTGAGAAAATCCAC 9634
||| |||| ||| || || || ||
Sbjct 11595 CTCTGGTTTCTTCAGGAACTCAAC 11618
>seq1869705
Length=65823
Score = 125 bits (138), Expect = 8e-24
Identities = 325/484 (67%), Gaps = 16/484 (3%)
Strand=Plus/Plus
Query 9204 CCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACA 9263
|| || ||||| | || |||| || | |||||| ||||| || || ||||||||||
Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164
Query 9264 ATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTC 9322
| || || ||| | ||||| ||||||||||| || | | |||||| | || |||||
Sbjct 20165 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 20223
Query 9323 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 9379
||||||||||| || |||| || || | | ||| ||||||| ||||| |
Sbjct 20224 TCGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAG 20280
Query 9380 CTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAAC 9439
||||| ||||| | |||||| ||| |||||| || | | || ||||| |||||
Sbjct 20281 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAAAGATCACGAAC 20340
Query 9440 CCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGA 9498
||| ||| || || || ||||||||||| | ||| | | | ||| || | | ||
Sbjct 20341 CCTAGAGGCTCCTACTCCTACAAACATCTCTATAAATTCAGACCCAGAA-ATAGAAAAGA 20399
Query 9499 AGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCT 9558
||||||| | |||||| || || |||| || | | || || || || || ||
Sbjct 20400 AGGGGACCCCCGCTTCACCAGCGATTGCTCTTGCCAACAATGTTTTTCCAGTTCCAGGAG 20459
Query 9559 TACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCG---CCACTTCCAAAGTATCTCTCAG 9615
||| | | | | | |||| ||| | || ||| |||| | || | || |||| |
Sbjct 20460 GACCTACCAACAAGAC-CCCCTTGGGA-ATTCGCGCTCCCAC-TGCAGTGAATTTCTCTG 20516
Query 9616 GTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAA 9675
||| ||| | ||| ||||| || || | || || | |||||| | || | || |||
Sbjct 20517 GTTTCTTCAAAAATTCCACTATTTCCTTGAAATCTTGTTTGGCTTCTTCTACACCAGCAA 20576
Query 9676 CATC 9679
||||
Sbjct 20577 CATC 20580
>seq2002493
Length=19711
Score = 102 bits (112), Expect = 9e-17
Identities = 248/368 (67%), Gaps = 17/368 (5%)
Strand=Plus/Plus
Query 6949 CACCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGT 7006
|||| || |||||| | || |||||| ||||| | ||| || | ||||| ||| |
Sbjct 12363 CACCCCAGAACGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCT 12420
Query 7007 TGCGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTC 7063
||| || |||||| || ||||| ||| | ||| | || ||| ||||||| |||
Sbjct 12421 TGCAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAA 12477
Query 7064 CGGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGAT 7123
|| |||||||||||||| || || || || |||||| |||||||||||| ||||||
Sbjct 12478 TGGGATCCTCTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGAT 12537
Query 7124 TACCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAA 7180
||| || | | ||||| | || | | ||| || | | ||||| ||
Sbjct 12538 CACCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAA 12594
Query 7181 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCAT 7240
| || || || |||||||| || ||||||||| || || |||||| | ||
Sbjct 12595 TCTCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGAT 12654
Query 7241 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAG-TGA 7299
| | || ||||| | |||| || ||||| || || || | ||| | |||| | | |||
Sbjct 12655 GGTGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGA 12714
Query 7300 GGCGGTTC 7307
|| | |||
Sbjct 12715 GGAGTTTC 12722
>seq2074987
Length=98398
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228
||| |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||| |||
Sbjct 15417 TATGGTGTAGTGGTTATCACTTTGTACTTTGAATCCAACGACCTTGGTTCAAGTCCCGGT 15358
Query 136229 AGGAGCT 136235
|||| ||
Sbjct 15357 AGGACCT 15351
>seq1994730
Length=131235
Score = 86.0 bits (94), Expect = 7e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 106241 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299
|| ||||| ||||||| | || | |||||||||| ||| || || || ||||||||
Sbjct 120006 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 120064
Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 106359
| |||||||||||||| |||||||| |||| ||||| || || ||||| ||||
Sbjct 120065 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 120124
Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403
||||||| | ||| || |||| ||||| || |||||
Sbjct 120125 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 120168
>seq1886602
Length=15129
Score = 86.0 bits (94), Expect = 7e-12
Identities = 119/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 106241 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299
|| ||||| ||||||| | || | |||||||||| ||| || || || ||||||||
Sbjct 12395 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 12453
Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 106359
| |||||||||||||| |||||||| |||| ||||| || || ||||| ||||
Sbjct 12454 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 12513
Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403
||||||| | ||| || |||| ||||| || |||||
Sbjct 12514 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 12557
>seq1429029
Length=1223
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228
||| |||||||||| |||||| ||||||||||||||||| | | ||||| ||||| |||
Sbjct 1068 TATGGTGTAGTGGTTATCACTCTGGACTTTGAATCCAACGAACTAGGTTCGAATCCCGGT 1009
Query 136229 AGGAGCTTTACCCA 136242
|||| ||||| |||
Sbjct 1008 AGGAACTTTAGCCA 995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567610778247280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |