Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2049698 131 2e-25 seq1869705 125 8e-24 seq2002493 102 9e-17 seq2074987 86.0 7e-12 seq1994730 86.0 7e-12 seq1886602 86.0 7e-12 seq1429029 84.2 2e-11 >seq2049698 Length=133754 Score = 131 bits (144), Expect = 2e-25 Identities = 300/444 (68%), Gaps = 6/444 (1%) Strand=Plus/Plus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 |||||| || ||||| || | | || ||||||| |||||| | | || || || || Sbjct 11178 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 11237 Query 9254 GATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 || |||| ||||| || ||| | |||||||||||||| ||||| | ||| || || | Sbjct 11238 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 11296 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 9371 |||||||| || |||||||| || | || |||| | | ||| | || || Sbjct 11297 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 11355 Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 |||||||| ||||| | ||| ||||| || || |||||| ||| ||| || || Sbjct 11356 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 11415 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491 || || || || || || | ||| ||||||||||| ||||| | | | | | || Sbjct 11416 TCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AGAT 11474 Query 9492 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 | || |||||| ||| || ||| || |||||||| ||| || | |||||| || || Sbjct 11475 AGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAGT 11534 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610 ||||| |||| | || || | || ||||| || ||| || || | || Sbjct 11535 CCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAACCT 11594 Query 9611 CTCAGGTTGCTTGAGAAAATCCAC 9634 ||| |||| ||| || || || || Sbjct 11595 CTCTGGTTTCTTCAGGAACTCAAC 11618 >seq1869705 Length=65823 Score = 125 bits (138), Expect = 8e-24 Identities = 325/484 (67%), Gaps = 16/484 (3%) Strand=Plus/Plus Query 9204 CCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACA 9263 || || ||||| | || |||| || | |||||| ||||| || || |||||||||| Sbjct 20105 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 20164 Query 9264 ATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTC 9322 | || || ||| | ||||| ||||||||||| || | | |||||| | || ||||| Sbjct 20165 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 20223 Query 9323 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 9379 ||||||||||| || |||| || || | | ||| ||||||| ||||| | Sbjct 20224 TCGTTCATCATTGCCT---CCACCAATTCCTGCTCCCCTCTGCCTTCCCACTGCATCGAG 20280 Query 9380 CTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAAC 9439 ||||| ||||| | |||||| ||| |||||| || | | || ||||| ||||| Sbjct 20281 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAAAGATCACGAAC 20340 Query 9440 CCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGA 9498 ||| ||| || || || ||||||||||| | ||| | | | ||| || | | || Sbjct 20341 CCTAGAGGCTCCTACTCCTACAAACATCTCTATAAATTCAGACCCAGAA-ATAGAAAAGA 20399 Query 9499 AGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCT 9558 ||||||| | |||||| || || |||| || | | || || || || || || Sbjct 20400 AGGGGACCCCCGCTTCACCAGCGATTGCTCTTGCCAACAATGTTTTTCCAGTTCCAGGAG 20459 Query 9559 TACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCG---CCACTTCCAAAGTATCTCTCAG 9615 ||| | | | | | |||| ||| | || ||| |||| | || | || |||| | Sbjct 20460 GACCTACCAACAAGAC-CCCCTTGGGA-ATTCGCGCTCCCAC-TGCAGTGAATTTCTCTG 20516 Query 9616 GTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAA 9675 ||| ||| | ||| ||||| || || | || || | |||||| | || | || ||| Sbjct 20517 GTTTCTTCAAAAATTCCACTATTTCCTTGAAATCTTGTTTGGCTTCTTCTACACCAGCAA 20576 Query 9676 CATC 9679 |||| Sbjct 20577 CATC 20580 >seq2002493 Length=19711 Score = 102 bits (112), Expect = 9e-17 Identities = 248/368 (67%), Gaps = 17/368 (5%) Strand=Plus/Plus Query 6949 CACCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGT 7006 |||| || |||||| | || |||||| ||||| | ||| || | ||||| ||| | Sbjct 12363 CACCCCAGAACGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCT 12420 Query 7007 TGCGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTC 7063 ||| || |||||| || ||||| ||| | ||| | || ||| ||||||| ||| Sbjct 12421 TGCAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAA 12477 Query 7064 CGGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGAT 7123 || |||||||||||||| || || || || |||||| |||||||||||| |||||| Sbjct 12478 TGGGATCCTCTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGAT 12537 Query 7124 TACCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAA 7180 ||| || | | ||||| | || | | ||| || | | ||||| || Sbjct 12538 CACCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAA 12594 Query 7181 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCAT 7240 | || || || |||||||| || ||||||||| || || |||||| | || Sbjct 12595 TCTCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGAT 12654 Query 7241 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAG-TGA 7299 | | || ||||| | |||| || ||||| || || || | ||| | |||| | | ||| Sbjct 12655 GGTGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGA 12714 Query 7300 GGCGGTTC 7307 || | ||| Sbjct 12715 GGAGTTTC 12722 >seq2074987 Length=98398 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| ||||||||| |||||||||||||| ||| |||||||| ||| ||| Sbjct 15417 TATGGTGTAGTGGTTATCACTTTGTACTTTGAATCCAACGACCTTGGTTCAAGTCCCGGT 15358 Query 136229 AGGAGCT 136235 |||| || Sbjct 15357 AGGACCT 15351 >seq1994730 Length=131235 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 106241 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 || ||||| ||||||| | || | |||||||||| ||| || || || |||||||| Sbjct 120006 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 120064 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 106359 | |||||||||||||| |||||||| |||| ||||| || || ||||| |||| Sbjct 120065 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 120124 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||||||| | ||| || |||| ||||| || ||||| Sbjct 120125 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 120168 >seq1886602 Length=15129 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 106241 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 || ||||| ||||||| | || | |||||||||| ||| || || || |||||||| Sbjct 12395 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 12453 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 106359 | |||||||||||||| |||||||| |||| ||||| || || ||||| |||| Sbjct 12454 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 12513 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||||||| | ||| || |||| ||||| || ||||| Sbjct 12514 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 12557 >seq1429029 Length=1223 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| |||||| ||||||||||||||||| | | ||||| ||||| ||| Sbjct 1068 TATGGTGTAGTGGTTATCACTCTGGACTTTGAATCCAACGAACTAGGTTCGAATCCCGGT 1009 Query 136229 AGGAGCTTTACCCA 136242 |||| ||||| ||| Sbjct 1008 AGGAACTTTAGCCA 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567610778247280