Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq2065080 163 4e-35 >seq2065080 Length=53610 Score = 163 bits (180), Expect = 4e-35 Identities = 458/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Plus Query 33118 AAGAACTTGTTAATATGTACTGTATAATCAATATTACGAATACGGGTTTCTTCAGTACCT 33177 || || || ||||| |||| | ||||| | || | | || | ||||| | ||| Sbjct 24394 AATAATTTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCT 24453 Query 33178 TTATTATTTTTCAATACCAGAAGCTTTTCAACTTCCAAATGCCACATAGGATAGTTAATA 33237 |||||||||| || || | | || || ||||| |||||||| |||||||| | | Sbjct 24454 CTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGA 24513 Query 33238 TTACCACTACCNNNNNGAACACCACCTTGGCTACAGCTCTTAACACCGGTAGTAAAATGT 33297 || || ||| ||| |||||||| ||| |||||| | || ||||||| Sbjct 24514 GTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGT 24573 Query 33298 TTCCAGAATGGAATGACCCCAGTGTGGGAAACTTCCCCCGAGCGGATACGAGATCCTTCA 33357 || |||| || || ||||| || | ||||||| | ||| || ||| || Sbjct 24574 TTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACA 24633 Query 33358 GCACGAATAGCACCACCATTAATACCAATACCGGCACGGCGGGAAATATATTTCATTATC 33417 |||||||| || ||||||| ||||| || || | | || | |||||| | ||| Sbjct 24634 GCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATT 24693 Query 33418 GCTTTTGATGTTTCTCCGATAGATTCAAGAGAGTCACCGGATTCAATTTTAACGCATGAG 33477 | | | |||| | ||||| || | | ||| | |||||||| ||| || ||| Sbjct 24694 GAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAG 24753 Query 33478 CTAAATTGACGAGTTGGAGTTCTTACACCAGAAAGAATTGGTGTCGGTAGAGAAATTTCA 33537 |||||||| | ||| |||||||||||||| | | ||| ||||| |||||||| ||| | Sbjct 24754 CTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTA 24813 Query 33538 AAATTACTAGCGGCATTATAAAAATCGATAACATATTCCAAAC-GTTTGGAAACGTCTTC 33596 ||| || | || | |||||| | ||| ||| || || | ||| | | | | Sbjct 24814 AAAGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTATTTTTATGAGAATAC 24873 Query 33597 TTCTTGATGAAGACACATAGCT--TGTAA-CATATATGCAAACTGTGGAGTTTCATAAAT 33653 ||| || || | |||| ||| ||| |||||| ||| || ||| |||| || || Sbjct 24874 TTC--GA-AAATAAACAT-GCTGAAATAAGAATATATAAAAATTGAGGACTTTCGTATAT 24929 Query 33654 TGTACCGTTAGAACGGTCTTTT--ACAAGATATTTTTCTTTATACTGCATAGCACCAGCA 33711 | | || | ||| | |||| || | ||||||| ||| || | || ||||| Sbjct 24930 TTTTCC--TGTAACCCTATTTTGAACTAAATATTTTCCTTCTAGTTGTTTTACAGCAGCA 24987 Query 33712 TAAGTGAAATTCATATCTCGGGTGTGATCGATAATACCTTGTAGAATTTCATATTCTTTT 33771 || | ||||||||||||| | ||||| |||| | | ||||| |||||||||| Sbjct 24988 TATGAAAAATTCATATCTCTATTATGATCAATAAATGTGTTCATAATTTGATATTCTTTT 25047 Query 33772 TCAGAATATTTATAT-ATCAGATCTCGATCATA 33803 |||||| ||| || | || || | || |||||| Sbjct 25048 TCAGAAAATTCATTTAATAAGCTTTC-ATCATA 25079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 724068641285680