Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 163 4e-35
>seq2065080
Length=53610
Score = 163 bits (180), Expect = 4e-35
Identities = 458/693 (66%), Gaps = 14/693 (2%)
Strand=Plus/Plus
Query 33118 AAGAACTTGTTAATATGTACTGTATAATCAATATTACGAATACGGGTTTCTTCAGTACCT 33177
|| || || ||||| |||| | ||||| | || | | || | ||||| | |||
Sbjct 24394 AATAATTTATTAATTTGTATAGCGTAATCTACATGTCTTACTCGATTATCTTCTATTCCT 24453
Query 33178 TTATTATTTTTCAATACCAGAAGCTTTTCAACTTCCAAATGCCACATAGGATAGTTAATA 33237
|||||||||| || || | | || || ||||| |||||||| |||||||| | |
Sbjct 24454 CTATTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGA 24513
Query 33238 TTACCACTACCNNNNNGAACACCACCTTGGCTACAGCTCTTAACACCGGTAGTAAAATGT 33297
|| || ||| ||| |||||||| ||| |||||| | || |||||||
Sbjct 24514 GTAGCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGT 24573
Query 33298 TTCCAGAATGGAATGACCCCAGTGTGGGAAACTTCCCCCGAGCGGATACGAGATCCTTCA 33357
|| |||| || || ||||| || | ||||||| | ||| || ||| ||
Sbjct 24574 TTGTAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACA 24633
Query 33358 GCACGAATAGCACCACCATTAATACCAATACCGGCACGGCGGGAAATATATTTCATTATC 33417
|||||||| || ||||||| ||||| || || | | || | |||||| | |||
Sbjct 24634 GCACGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATT 24693
Query 33418 GCTTTTGATGTTTCTCCGATAGATTCAAGAGAGTCACCGGATTCAATTTTAACGCATGAG 33477
| | | |||| | ||||| || | | ||| | |||||||| ||| || |||
Sbjct 24694 GAACTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAG 24753
Query 33478 CTAAATTGACGAGTTGGAGTTCTTACACCAGAAAGAATTGGTGTCGGTAGAGAAATTTCA 33537
|||||||| | ||| |||||||||||||| | | ||| ||||| |||||||| ||| |
Sbjct 24754 CTAAATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTA 24813
Query 33538 AAATTACTAGCGGCATTATAAAAATCGATAACATATTCCAAAC-GTTTGGAAACGTCTTC 33596
||| || | || | |||||| | ||| ||| || || | ||| | | | |
Sbjct 24814 AAAGTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTATTTTTATGAGAATAC 24873
Query 33597 TTCTTGATGAAGACACATAGCT--TGTAA-CATATATGCAAACTGTGGAGTTTCATAAAT 33653
||| || || | |||| ||| ||| |||||| ||| || ||| |||| || ||
Sbjct 24874 TTC--GA-AAATAAACAT-GCTGAAATAAGAATATATAAAAATTGAGGACTTTCGTATAT 24929
Query 33654 TGTACCGTTAGAACGGTCTTTT--ACAAGATATTTTTCTTTATACTGCATAGCACCAGCA 33711
| | || | ||| | |||| || | ||||||| ||| || | || |||||
Sbjct 24930 TTTTCC--TGTAACCCTATTTTGAACTAAATATTTTCCTTCTAGTTGTTTTACAGCAGCA 24987
Query 33712 TAAGTGAAATTCATATCTCGGGTGTGATCGATAATACCTTGTAGAATTTCATATTCTTTT 33771
|| | ||||||||||||| | ||||| |||| | | ||||| ||||||||||
Sbjct 24988 TATGAAAAATTCATATCTCTATTATGATCAATAAATGTGTTCATAATTTGATATTCTTTT 25047
Query 33772 TCAGAATATTTATAT-ATCAGATCTCGATCATA 33803
|||||| ||| || | || || | || ||||||
Sbjct 25048 TCAGAAAATTCATTTAATAAGCTTTC-ATCATA 25079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 724068641285680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |