Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_015457.1 Length=165919 Score E Sequences producing significant alignments: (Bits) Value seq2065080 206 3e-48 >seq2065080 Length=53610 Score = 206 bits (228), Expect = 3e-48 Identities = 302/423 (71%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 138021 TAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACGAGAAGA 138080 ||||| | ||| | | || || ||||||| ||| | |||||||| ||||| | | | Sbjct 24418 TAATCTACATGTCTTACTCGATTATCTTCTATTCCTCTATTATTTTTTAAAACTAACAAA 24477 Query 138081 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGAATTCCA 138140 || || ||||| |||||||||||||||||| | ||||||||| || || | || |||| Sbjct 24478 TTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTAGCAGCACCTCCTCTAACTCCA 24537 Query 138141 CCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTA 138200 || || ||||| |||||||||||||| ||||||||||| | ||||| ||| ||||||| Sbjct 24538 CCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTGTAGAAAGGTATACAACCAGTA 24597 Query 138201 TGACGTACTTCACCTGTACCAATCTTAGAACCTTCG---GCACGAATCATACCAACGTTA 138257 ||| | |||| ||| || | ||| || | || |||||||| || || ||| Sbjct 24598 TGAAATGCTTCCCCT---CCTCTAATAGGACTTCCGACAGCACGAATTTGCCCTACATTA 24654 Query 138258 ATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCTTTGTTAATA 138317 || |||||||| || | || || | ||||| || |||||| || | | |||||| Sbjct 24655 ATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAACTAGCTGTTGCATTAATA 24714 Query 138318 GACTTCAGCGAATCACCTGCTTCAATAACAACGCATGAACTAAACTGCCGAGTTGGAGTA 138377 || | | |||| | |||||| | ||| || || ||||| |||| ||| ||||| Sbjct 24715 GAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTAAATTGCCTAGTAGGAGTT 24774 Query 138378 C-GACAGCCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTAGATACCGCTTCATA 138436 | ||| || |||||||| || ||||||| || || |||||| | || ||||| Sbjct 24775 CTTACA-CCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAAGTAGAAATAGCGTCATA 24833 Query 138437 AAA 138439 ||| Sbjct 24834 AAA 24836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510686223198480