Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq2065080 673 0.0 >seq2065080 Length=53610 Score = 673 bits (746), Expect = 0.0 Identities = 2125/3266 (65%), Gaps = 129/3266 (4%) Strand=Plus/Minus Query 70592 ATAAGATCCATAAAGTAATCGCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCTC 70651 ||||||| |||||||| | |||||| || | ||| | | ||| | ||| | || | Sbjct 25363 ATAAGATTCATAAAGTGTTGAATTGGGCTTCAAAAGGATTACAGAATATTTCAATTTCAC 25304 Query 70652 AAGTTGAATTGAAATCTCATATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCACG 70711 |||| ||||| ||| || ||||| ||| | || || || ||| ||||||| | Sbjct 25303 AAGTAGAATTACGTTCTAGAATTCAATTCTATAATGGAATTAAAACAATTCATATTCATG 25244 Query 70712 AAATAATCATTAAAGCAGCAGCAGATTTAATATCGGTTGACACTCCTGATTATCAGTATC 70771 ||| ||| ||||||||||| || |||||||| || || || |||||||| ||| Sbjct 25243 AAACAATTATTAAAGCAGCTGCTGATTTAATTTCTAAAGAAGTGCCAGATTATCAATATA 25184 Query 70772 TCTCATCTCGTTTAGCCGTATTTCATTTACGTAAACAAGCCTATGGTGATTTTGTACCAC 70831 | | | | ||| | | |||||| | || ||| |||| ||||| | ||| ||| | Sbjct 25183 TGGCTGCCAGATTATCTATTTTTCATCTTCGAAAAAAAGCATATGGAAAATTTTCACCTC 25124 Query 70832 CTCGCCT-TATCAACCATATAGCTAAGTTGACAGATAGTGGTCATTATGATAAAGAAATT 70890 || | ||||||| || | || || || || | |||| | ||| | || Sbjct 25123 CTAAGTTATATCAAC---ATGTCAAA----AC---TAATGTT--TTATTAAAAAAATATG 25076 Query 70891 CTTGAAGATTTTACCAT-----TGGTGAAATTGAAGA----ATTAGGTA---ATTACATT 70938 | ||| || | || | ||||| ||| | |||| | | ||| ||| Sbjct 25075 ATGAAAGCTTATTAAATGAATTTTCTGAAAAAGAATATCAAATTATGAACACATTT-ATT 25017 Query 70939 CAGCATGACCGTGATATGAATATTGCCTATGCAGGTATTAAGCAATTAATCGGTAAGTAT 70998 | ||| | | ||||||||| || | ||||| | | | || ||| || || || ||| Sbjct 25016 GATCATAATAGAGATATGAATTTTTCATATGCTGCTGTAAAACAACTAGAAGGAAAATAT 24957 Query 70999 TTGGTTCAGGACAGAGTTAATGGTATTATCTTTGAAACCCCTCAAATGCTTTATATGCTT 71058 || ||||| | || |||| || | || | |||| |||||| | | ||||| ||| Sbjct 24956 TTAGTTCAAAATAGGGTTACAGGAAAAATATACGAAAGTCCTCAATTTTTATATATTCTT 24897 Query 71059 GTTGGTATGTGTTTATACTCTAAAAAGTATAGCGGCAAAGTTCGTATGAATTACATCAAA 71118 || ||||||| || || |||| ||| | | | |||| || ||| Sbjct 24896 ATTTCAGCATGTTTATTTTCGAA---GTATTCTCATAAAAATAGATTAGATTATATTAAA 24840 Query 71119 GAGTGGTATGATGCAACAAGTACATTTGAGCTATCATTACCAACACCTATTATGGGTGGT 71178 | | ||||| || | ||| ||| |||| |||||||||| ||||||| ||| Sbjct 24839 AAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGT 24780 Query 71179 GTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAGATTGACAGTGGCGATAGCCTA 71238 ||| | ||||| || || |||||||| |||||| ||||| ||| |||| || Sbjct 24779 GTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720 Query 71239 GATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTATCCAAACGTGCAGGTATC 71298 ||||| |||||||| | | |||||||| || || |||||||| || | ||||| || Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 71299 GGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATACGCAATGGTGAAGCAGTT 71358 || || ||||| || |||||||||| | ||||||||||| | || |||||| || Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 71359 CATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCAGTCAAATCTTGCTCTCAG 71418 |||||||||| ||||| |||| || ||||| ||||| || || ||||| |||||||| Sbjct 24599 CATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCAA 24540 Query 71419 GGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATGTGGCATTTAGAAGTTGAA 71478 || || | | || ||||||||||| ||| || ||||| |||||||||||||| || Sbjct 24539 GGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGAG 24480 Query 71479 AGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAACCGTGTACGTCATTTAGAC 71538 | | ||||| || |||||||| | ||| | |||||||| || ||| | ||| |||| Sbjct 24479 AATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTAGAT 24420 Query 71539 TATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTGATTACAGGTGGCAATATTACA 71598 || ||| | ||| | ||||| | | || ||| || || | | | || |||| Sbjct 24419 TACGCTATACAAATTAATAAATTATTATATCAAAGAATGTTATCTAGAAAAAAAATTAGT 24360 Query 71599 TTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCATTCTTTGCCGACCAAGATAAG 71658 || || ||| || ||| |||||||| || ||| | |||||| || Sbjct 24359 TTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTTTTTTTCTGACCAAATAAAA 24300 Query 71659 TTTGAAAAGTTATATACTGAAGCTGAAGGTAATCCTATGATTATCCAAAAGTCAGTAAAA 71718 |||||| | ||||| || |||| || | |||| |||| | | || Sbjct 24299 TTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAATTAAAAAAAAAGAAATTAAG 24240 Query 71719 GCTAGTGACTTATTTACATTGTTTGCACAAGAGCGAGCAGGTACAGGTCGTATCTATCTT 71778 | | || |||||| | || || |||||| || | |||||| | |||||| | Sbjct 24239 TCCATAGATTTATTTTCTTTATTGATGCAAGAGAGAACTTCTACAGGAAGAATCTATATA 24180 Query 71779 CAAAACGTAGATCACTGTAATACCAATAGCCCATTTATTGCAGAAGTTGCCCCTATTCGT 71838 ||||| |||||||| |||||||| |||| | ||| | || || | || ||||| | Sbjct 24179 CAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATCCAAAAATAGCTCCTATCAGA 24120 Query 71839 ATGAGTAACTTATGCCTTGAAATTGCATTACCAACTGAACC--TATGCAGGATATTA-AT 71895 ||| ||||| || ||||| | ||||| ||| |||| ||| | || ||| || Sbjct 24119 CAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAACCATTATCTAATATTTTAGAT 24060 Query 71896 AAGCCTGAAGGTGAAATTGCATTATGTACATTAGCTGCATTCAATCTTGGTGCCATTAAA 71955 || | || ||||| ||||||||||| || |||| || ||| | || || ||| Sbjct 24059 AA---AAATGGAGAAATAGCATTATGTACTCTATCTGCTTTAAATTTAGGAAAAATAAAA 24003 Query 71956 GAT-TTAGGTCGTATGGAAAAATTATCCGAATTAGTTATTAGAGCATTAGATGCTTTACT 72014 || ||| | | || ||||||| | ||| || | | || | |||||||| | Sbjct 24002 AATATTAAAGAAT-TAGATGAATTATCTAATTTAATTGTACGTGCCCTTGATGCTTTGTT 23944 Query 72015 TGATTACCAAGATTATCCAATACTAGCTGCTGAAAATGCTACCAAGCGAAGACGTACTTT 72074 ||||| ||||| ||||| ||| || |||| ||| || | | ||||| | || | Sbjct 23943 AGATTATCAAGAATATCCTATAATAAGTGCTAAAATTGGAGCAATAGGAAGAAGAGCTAT 23884 Query 72075 AGGTGTTGGCATTATTAATTATGCTCATCACTTAGCTAAAAATGGTGTTAAATATTCTGA 72134 || || || ||| || | |||| || | | || |||||| ||||||||||||||| Sbjct 23883 CGGAGTAGGAGTTACGAACTTTGCTTATTATCTTGCAAAAAATAATGTTAAATATTCTGA 23824 Query 72135 TGGCAGTGCCAACAATTTAACTCATGAACTCTTCGAAAGTTTTCAGTATTACCTATTGAA 72194 ||| ||||| || || ||||| ||| || || ||| | | || ||||| |||| || Sbjct 23823 TGGAAGTGCTAATAAATTAACACATCAAACATTTGAAGCTATACAATATTATTTATTAAA 23764 Query 72195 AGCAAGTTGTGATTTAGCCAAAGAACAAGGCGCTTGTCCTGCATTCCATGAGACAACTTA 72254 ||| |||| || |||| |||||| |||| ||||| || || || | |||| || Sbjct 23763 CGCATCTTGTAATCTAGCAAAAGAAAAAGGAACTTGTTCTTTATATAATCAAACAAAGTA 23704 Query 72255 TTCACAGGGTATATTACCTATTGACCGCTATAATAAGTCAGTAGATGGTATTCATA-GTG 72313 ||| ||| || |||| ||||| ||||| |||| | | || || ||||| | | Sbjct 23703 TTCGTTAGGTTTACTACCAATTGATACTTATAA-AAGT--GAAATTGATA-TCATATGCG 23648 Query 72314 AAGA---GTTACATCTTCCGTGGGAGCAATTGAGAGAAGATATTTTGAAATACGGTTTAC 72370 | || || ||| | ||||| || ||| || | || | ||||| |||||| Sbjct 23647 ACGAACCATTGCATTTAAACTGGGAATTTTTAAGAAAAAAAATATCAAAATATGGTTTAA 23588 Query 72371 GTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTTCTCAGGTATCTAATGCAA 72430 | || ||||| |||| | | ||||| |||||| |||||| |||| ||||||| Sbjct 23587 GAAACTCTACACTATCTGCTATTATGCCTTCAGAAACATCTTCTCAAATATCAAATGCAA 23528 Query 72431 CAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGTAAAGATGGTATCT 72490 | ||||| || || || ||| | || || || || || |||||| |||||||||||| Sbjct 23527 CTAATGGAATAGAGCCTCCTAGAGGATTTATTAGTATAAAAGCATCTAAAGATGGTATGC 23468 Query 72491 TGAAGCAAGTAG-TACCTCATATTGGTACAATGGCTAAT--GACTATGAATTGTTGTGGA 72547 | || ||||| | | || |||| | || ||| | |||||||| || ||| Sbjct 23467 TTAAACAAGTTGTTCCCGAATAT---AAAAAACTAAAATCAAAGTATGAATTATTATGGG 23411 Query 72548 ATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGTTTGTCGATC 72607 |||| || |||| || ||| || ||||||||| || |||||||| ||||| |||| Sbjct 23410 ATATACCGGATAATATCGGATATCTTAAATTAGTTGGTATTATGCAAAAATTTGTTGATC 23351 Query 72608 AGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCAAAGTCCCAG 72667 | |||| ||| | || || |||||||| || | ||||| || |||| ||| | || Sbjct 23350 AATCAATTTCTACTAATACTAATTATGATCCATCAAAATTTCCAGATGGAAAAATTCCGA 23291 Query 72668 TTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAACATTCTATT 72727 | || | | || ||||||||| || | |||||| | || | ||||| || |||| Sbjct 23290 TGAAATTATTACTAAAAGATTTATTAACTGCTTATAAGTTAGGAATAAAAACTTTATATT 23231 Query 72728 ACCATAACACCCGTGATG----------------GTGCCAGTGAAGGTATAGAAGAAGAA 72771 | || || ||| | || | | | | | | ||| | | | || Sbjct 23230 ATCAAAATACCAGAGAAGGAAATATTAACAAGACGAACAATTTTAATTATTGTA-TACAA 23172 Query 72772 GATGAAAGCTGTGGTGGTGGGGCATGT--------AAAAT---------------CTAAC 72808 | |||| |||| |||| |||||| ||||| |||| Sbjct 23171 CAAGAAAATTGTGAAAGTGGCGCATGTAATTTATAAAAATATTATTTAAAATATGTTAAC 23112 Query 72809 AACTCAAAGGAGT-TTAATATGACAGAACGGTATACAACTTTCGATAAACGACCTAACAA 72867 | | | ||||| |||||||||| ||||||||||| ||| | || | Sbjct 23111 TATTTTACGGAGTATTAATATGAC------TTATACAACTTTTTCAAAAAAAAAAAATGA 23058 Query 72868 TGTATTAGAAGAAGATATGTTCTTAGGTCAACATGTAAACGTATCTCGGTACGACCAACA 72927 | || ||||| ||||| || || |||| || || | || | || || ||||| Sbjct 23057 TCCTTTGCAAGAACCAATGTTTTTTGGACAACCAGTTAATATTTCCAGATATGATCAACA 22998 Query 72928 AAAGCTTAGTGCATTTGAAAAATTAATAGAAAAACAATTGAGCTTCTTTTGGCGACCTGA 72987 ||| || |||||||||||||||||||||||| | || |||||| ||||||| Sbjct 22997 AAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTTCTTTTTTTTGGAGACCTGA 22938 Query 72988 TGAAATAGATGTATCAAAAGACCGTTCTGATTGGCAAAAAATGACTGACTCTGAAAAGCA 73047 ||||||||| |||| ||||| || |||| | || || | | |||||| || Sbjct 22937 AGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATTTGCCAAAACATGAAAAACA 22878 Query 73048 TATTTTCATATCAAATCTTAAATACCAAACATTGCTTGATAGCATGGCTGCACGTTCTGT 73107 ||||| || ||| | ||||| ||||| || || ||| || | | | | Sbjct 22877 CATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATTCAATTCAAGGAAGAAGTCC 22818 Query 73108 TAATATGGTATTACTTCCACTTGTATCTTTACCTGAAGTTGAAACATGGATTGAAACATG 73167 ||||| | || | || ||||||| |||||||| | ||||||||||||||||| || Sbjct 22817 AAATATAGCTTTTTTGCCTGTTGTATCAATACCTGAATTAGAAACATGGATTGAAACTTG 22758 Query 73168 GGCATTTAGTGAAACTATTCACTCTCGCTCATATACTCATATCTTGCGTAACCTTTTCGT 73227 | ||||| ||||||||| || ||||| || ||||||||||| | || ||| | Sbjct 22757 GTCATTTTCTGAAACTATACATTCTCGATCTTATACTCATATAATTCGAAACATAACAAA 22698 Query 73228 AGATCCAAGTGAAGTATTTGATGATATTACAATTAACCCTGAAATATTAAAACGTGCTGA 73287 |||| | ||||||| ||||||| || ||||| ||||| || | || | Sbjct 22697 TAATCCTTCATTAATATTTGAAGATATTATAAATAACCAATCAATATCTAATAGAGCAAA 22638 Query 73288 AAGTATCGCCAAATACTTTGATGATGTGAT---ACTGACAACTCAGT-TCATTCAATCTC 73343 | ||| | || | |||||| | || | |||| | | | |||| | | Sbjct 22637 AGATATTTCTTTTTATTACGATGATTTTATTCAATATACAAGTTATTGGCATTTATT--- 22581 Query 73344 AAGGTGAAGGTACTTATCAGGTCAATGGT-----GAAGAGTATGTAGTCTCAAAGCGTAA 73398 ||| ||||| | | | || | ||| | || | ||| || | | ||| || Sbjct 22580 -AGGAGAAGGAATTCAACAAATTAATAATCAAAAAAAAATTAT-TAAT-TTAAATTGT-- 22526 Query 73399 GCTTAAAGAGCGACTTTATCTTGCCGTT---TGTGCTGTCAATGCCTTAGAAGCTATCCG 73455 | ||| | | | ||||| | ||| || || || ||||| ||||||||||| | Sbjct 22525 -TTGAAAAAAAAATTATATCT--CTGTTTAATGAGC-GTAAATGCTTTAGAAGCTATTAG 22470 Query 73456 CTTTTACGTAAGTTTCGCATGTTCATTTGCTTTTGCAGAACGTGAGCTACTTGAAGGTAA 73515 ||||| || ||||| || || |||||||||||||| ||| | || | | ||||| || Sbjct 22469 ATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTTGCTGAAAGAGAAATTATGGAAGGAAA 22410 Query 73516 TGCCAAGATTATTAAACTAATCGCCCGTGATGAAGCCTTGCACTTAACTGGTACTCAGAT 73575 ||| || || ||| | |||| || | |||||||| || || |||||| ||||||| Sbjct 22409 TGCAAAAATCATTCGATTAATAGCAAGAGATGAAGCATTACATTTAACTAGTACTCAACA 22350 Query 73576 GATTCTGAATAACTGGCGAACTGGCAAGGATGATCCTGAA---ATGCAAGAGATTGCAGA 73632 || | |||| | | || ||| || || |||| ||| | ||| | | Sbjct 22349 TATAATTAATATTTTACAAA---ACAAAGAAAATAATGAAAATATGGCTAATATTACTAA 22293 Query 73633 AGACCTTAAAGATGTAAGTCTTAAGATCTTTATGGATGTTGTTGAAGAAGAAAAGCAATG 73692 ||| ||||||| |||| |||| || ||| | | | || |||| |||| || |||| Sbjct 22292 AGAATGCAAAGATGAAAGTTTTAAAATTTTTTTAAACGCTGCTGAACAAGAGAAAAAATG 22233 Query 73693 GGCAAAATATCTATTCAAAGATGGGTCAATGATCGGTCTTAATGAAGAAATACTTTGCCA 73752 ||| ||||| |||| ||||| || ||| | || | ||| ||||||| | || || Sbjct 22232 GGCTGAATATTTATTTTCTGATGGTTCTATGCTAGGATTAAATAAAGAAATTTTATGTCA 22173 Query 73753 GTACGTTGAGTACATTGCTAATCATC 73778 || |||| || ||| | || |||| Sbjct 22172 ATATATTGAATATATTAC-AAACATC 22148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323261131264474