Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq2065080 134 2e-26 >seq2065080 Length=53610 Score = 134 bits (148), Expect = 2e-26 Identities = 273/404 (68%), Gaps = 6/404 (1%) Strand=Plus/Minus Query 40684 TTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGTG 40743 || ||| |||| ||||| | || | | || |||| || || |||||||| ||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 40744 CGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTAATCGAATCGGGTGATTCTCTGGGT 40803 | |||||||| | || || | ||||||| |||| |||| | |||| | | | | Sbjct 24776 AGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTAGAT 24717 Query 40804 TCTCTGAACGCT---GTTACGTCCGCGATCGTGAAGTATATCTCTCAACGTGCTGGTATT 40860 ||| | || || | || || || || || ||| | |||||| | || || ||| Sbjct 24716 TCTATTAATGCAACAGCTAGTTCA---ATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 40861 GGTGTCAACGCCGGACACATTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTA 40920 || | || | || || ||||| ||| | || || | || || |||||| | Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 40921 CATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCCTGTTCCCAG 40980 ||||| || ||| || |||| ||||| |||| || || ||||||||||| || || Sbjct 24599 CATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCAA 24540 Query 40981 GGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAA 41040 || || ||| | || ||||| || || |||| |||||| || |||||| | ||||| || Sbjct 24539 GGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGAG 24480 Query 41041 AACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCG 41084 || |||| ||| | |||||||| | || | ||||| || || Sbjct 24479 AATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCG 24436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548473783429360