Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_019398.1
Length=178193
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 134 2e-26
>seq2065080
Length=53610
Score = 134 bits (148), Expect = 2e-26
Identities = 273/404 (68%), Gaps = 6/404 (1%)
Strand=Plus/Minus
Query 40684 TTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGTG 40743
|| ||| |||| ||||| | || | | || |||| || || |||||||| |||||
Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777
Query 40744 CGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTAATCGAATCGGGTGATTCTCTGGGT 40803
| |||||||| | || || | ||||||| |||| |||| | |||| | | | |
Sbjct 24776 AGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTAGAT 24717
Query 40804 TCTCTGAACGCT---GTTACGTCCGCGATCGTGAAGTATATCTCTCAACGTGCTGGTATT 40860
||| | || || | || || || || || ||| | |||||| | || || |||
Sbjct 24716 TCTATTAATGCAACAGCTAGTTCA---ATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660
Query 40861 GGTGTCAACGCCGGACACATTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTA 40920
|| | || | || || ||||| ||| | || || | || || |||||| |
Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600
Query 40921 CATACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCCTGTTCCCAG 40980
||||| || ||| || |||| ||||| |||| || || ||||||||||| || ||
Sbjct 24599 CATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCAA 24540
Query 40981 GGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAA 41040
|| || ||| | || ||||| || || |||| |||||| || |||||| | ||||| ||
Sbjct 24539 GGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGAG 24480
Query 41041 AACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCG 41084
|| |||| ||| | |||||||| | || | ||||| || ||
Sbjct 24479 AATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCG 24436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548473783429360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |