Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq2065080 161 2e-34 seq1506206 93.3 9e-14 seq3033322 89.7 1e-12 seq2525017 89.7 1e-12 seq2476118 89.7 1e-12 seq1244912 89.7 1e-12 seq2035815 86.0 1e-11 seq1545916 86.0 1e-11 seq2114724 84.2 5e-11 seq1518600 84.2 5e-11 seq964186 84.2 5e-11 >seq2065080 Length=53610 Score = 161 bits (178), Expect = 2e-34 Identities = 387/575 (67%), Gaps = 13/575 (2%) Strand=Plus/Minus Query 227028 TTTCTTCTGGACACCTGATGAGGTAGATTTATCTAAAGACCGAATAGATTTTAAATCACT 227087 ||| || |||| |||||| || |||||||||||||||| |||||||||||| || | | Sbjct 22955 TTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTT-AACAATT 22897 Query 227088 TACC-GATCACGAGAAGCACATATTTACTTCCAATCTAAAACGGCAAATTTTATTAGATT 227146 | || | || || || ||||| ||| ||| ||||| |||| ||| |||||| Sbjct 22896 TGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATT 22837 Query 227147 CTGTTCAAGGTAGGGGTCCAAATTTAGTACTGTTGCCATATGCATCATTACCAGAACTTG 227206 | ||||||| || |||||||| ||| | ||||| || |||| |||| ||| | | Sbjct 22836 CAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATCAATACCTGAATTAG 22777 Query 227207 AAAATTTTATTGAAACATGGTCATTTTTTGAAGGTTCTATACATAGTAAATCATATACAC 227266 ||| | |||||||| |||||||||| |||| |||||||| | ||| ||||| | Sbjct 22776 AAACATGGATTGAAACTTGGTCATTTTCTGAA---ACTATACATTCTCGATCTTATACTC 22720 Query 227267 ATATTATTCGAAATAT-ATATCCAAACCCAAGTGAAGTTTTTGATACTATGTTGGATATT 227325 |||| |||||||| || | | || || | || | ||||| ||| | ||| Sbjct 22719 ATATAATTCGAAACATAACAAATAATCCTTCATTAA-TATTTGAAGATATTATAAATA-A 22662 Query 227326 CCAGAAATTACATCAT-GTGCAACTGATATTTCAAAATATTATGATGATTTAGATAACTA 227384 ||| | || | || | |||| |||||||| ||||| |||||||| | | || Sbjct 22661 CCAATCAATATCTAATAGAGCAAAAGATATTTCTTTTTATTACGATGATTTTATTCAATA 22602 Query 227385 TGGAACTTATTATAAGTTATTGGGTGAAGGCACTCACACCGTTAATGGTGAAAAAATTGT 227444 | || ||||| | ||||| || ||||| | ||| ||||| | |||||| | Sbjct 22601 TACAAGTTATTGGCATTTATTAGGAGAAGGAATTCAACAAATTAATAATCAAAAAAAAAT 22542 Query 227445 TGTTGATATGTATGAGCTAAAGAAAAAACTATGGCTATGTATTAACAGTATTAATATTCT 227504 | || || | || | || |||||| ||| || ||| | | || | ||| | | Sbjct 22541 TATTAATTTAAATTGTTTGAAAAAAAAATTATATCTCTGTTTAATGAGCGTAAATGCTTT 22482 Query 227505 AGAAGGTATTCGTTTTTATGTTTCATTTGCGTGTTCCTGGGCATACGCCG--AGAACAAT 227562 ||||| |||| | |||||||| ||||| || || | || | || | ||| ||| Sbjct 22481 AGAAGCTATTAGATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTTGCTGAAAGAGAAAT 22422 Query 227563 CAACTTGAGGGGAATGCTAAAATAATTAGATTGAT 227597 | | || || ||||| ||||| ||| |||| || Sbjct 22421 TA--TGGAAGGAAATGCAAAAATCATTCGATTAAT 22389 Score = 98.7 bits (108), Expect = 2e-15 Identities = 476/744 (64%), Gaps = 30/744 (4%) Strand=Plus/Minus Query 224379 TCTTCCAACTCCAATTATGGCTGGACTACGTACTAACACTCGCCAATTTAGTTCTTGCGT 224438 ||| ||||| || |||||||| || || | ||| ||| | |||||||| ||||| || Sbjct 24804 TCTACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGT 24745 Query 224439 AGTTAT-GAACGTTGGTGATAGTCTAGACAGCATTAGTGCTGGTAACAG----TGCTATA 224493 | || ||| || | ||||| | |||| |||| ||| ||||| | | ||| Sbjct 24744 TTTAATTGAATGT-GCTGATAATTTAGATTCTATTAATGC----AACAGCTAGTTCAATA 24690 Query 224494 ATGCAGTATATTTCTAAGAAAGCCGGTTTGGGAGTCAACTATGGTCGTGTCCGTGCAGTT 224553 | | ||| | ||| | | ||| || | ||| | || || | | ||||| || Sbjct 24689 GTAAAATATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTC 24630 Query 224554 GGTTCAGAAATTCGTGGTGGTGATGCTGTTCATACTGGATTGATTCCATTCCTACACGCA 224613 || ||| | || || || || |||||||||| | || || ||| |||| || Sbjct 24629 GGAAGTCCTATTAGAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTC-TACAAACA 24571 Query 224614 GTTGCTAAAA-CTGTTAAATCTTGTTCTCAAGGTGGTGTGCGTGGTGGTGCAGCAACAGT 224672 || | || |||||||||| || ||||||||||| || | || ||||| || || | Sbjct 24570 TTTTCAAACTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCT 24511 Query 224673 CCACT-TCCCATTGTGGCATTACGAGTTTGAAGATCTTGTAGTACTAAAGAATAACAAAG 224731 | ||| ||| ||||||| || | || || | |||| |||| ||||| | || Sbjct 24510 GTTTTATCCTATT-TGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAG 24452 Query 224732 GTACAGAAGTATCTCGTGTTCGTCAGTTGGATTATTGTTTCCAAATTAATAAAACTTTCT 224791 | | ||||| ||| || | || | ||||| | | |||||||||||| || | Sbjct 24451 GAATAGAAGATAATCGAGTAAGACATGTAGATTACGCTATACAAATTAATAAATTATTAT 24392 Query 224792 ATCAACGCTTGATTGAACGTAAAGATATTACTTTCTTCTCTCCAAGTGATGTTCCTGGTT 224851 ||||| | || | | ||| | |||| ||| || ||| |||||||||| | Sbjct 24391 ATCAAAGAATGTTATCTAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTAT 24332 Query 224852 TGTATGATGCATTCTGTGCAGACCAAGAAAAATTTGAAAAGCTATACACTAAGTATGAAG 224911 | ||||| || | | | |||||| |||||||||| | ||||| || |||||| Sbjct 24331 TATATGAAAGTTTTTTTTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAA 24272 Query 224912 CTGATCCAAATATTCGTAAGA---AAACTATGCCAGCACTAGAAGTGTTCTCTCAACTAA 224968 ||| ||| ||| || | ||| || | | || |||| | || ||| | | | Sbjct 24271 AAGATAAAAAAATTAAAAAAAAAGAAATTAAGTC--CA-TAGATTTATTTTCTTTATTGA 24215 Query 224969 TGAATGAACGTTCTGAAACTGGACGTATCTATATCCAGAATATTGA-CTTAGTTAACGAA 225027 || | || | || || ||| | |||||||| || ||| | || | | || || Sbjct 24214 TGCAAGAGAGAACTTCTACAGGAAGAATCTATATACAAAATGTAGATCATTGT-----AA 24160 Query 225028 CACTCA----CCATTTGATCCTTCAGTAGCTCCGATTGAACAAAGTAATCTATGTCAAGA 225083 ||||| | |||||||| | ||||||| || |||| |||| |||||| || Sbjct 24159 TACTCATAGTTCTTTTGATCCAAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGA 24100 Query 225084 AATCGCACTACCTTCTGTGCCATT 225107 ||| | ||||| || ||||| Sbjct 24099 AATAACTTTACCTACTAAACCATT 24076 >seq1506206 Length=1356 Score = 93.3 bits (102), Expect = 9e-14 Identities = 85/106 (80%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 || ||||||||| ||| |||||||| ||||||||||||||||||||||| || ||||| Sbjct 369 TGTGGAGTAGAGTAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 425 Query 324479 GAATCCCACCTCCGC---ATCCAATTTTAAGAAGTATATGGGGCTA 324521 ||||||| |||||| | | || |||||||||| | || ||| Sbjct 426 AAATCCCATCTCCGCCAGACCAAAAGATAAGAAGTATTTTGGTCTA 471 >seq3033322 Length=123266 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| | ||||| Sbjct 80002 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 80058 Query 324479 GAATCCCACCTCCGC 324493 |||||| |||||| Sbjct 80059 AAATCCCGTCTCCGC 80073 >seq2525017 Length=144557 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 ||| |||||||| |||||||||||| |||||||||||||||||||||||| | ||||| Sbjct 55189 TGCAGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGCG---GGTTC 55133 Query 324479 GAATCCCACCTCCGC 324493 |||||| |||||| Sbjct 55132 AAATCCCGTCTCCGC 55118 >seq2476118 Length=328616 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/106 (79%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 324418 TTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTT 324477 |||| |||||||| |||||||||| | ||||||||||||||||||||||| || |||| Sbjct 196260 TTGCAGAGTAGAGTAGTCTGGTAGATCGCAAGGCTCATAACCTTGAGGTCATG---GGTT 196316 Query 324478 CGAATCCCACCTCCGC---ATCCAATTTTAAGAAGTATATGGGGCT 324520 | ||||||| || ||| | | | |||||||||||| || || Sbjct 196317 CAAATCCCATCTTCGCCAGACCAGAAGATAAGAAGTATATTGGTCT 196362 >seq1244912 Length=1267 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||| Sbjct 332 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 276 Query 324479 GAATCCCACCTCCGC 324493 ||||| |||||| Sbjct 275 AAATCCTGTCTCCGC 261 >seq2035815 Length=42525 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/66 (89%), Gaps = 3/66 (5%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||| Sbjct 16537 TGCGGAGTAGAGTAGTCTGGTAGCTAGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 16481 Query 324479 GAATCC 324484 ||||| Sbjct 16480 AAATCC 16475 >seq1545916 Length=1208 Score = 86.0 bits (94), Expect = 1e-11 Identities = 59/66 (89%), Gaps = 3/66 (5%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||| Sbjct 320 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 264 Query 324479 GAATCC 324484 ||||| Sbjct 263 AAATCC 258 >seq2114724 Length=2508 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| | ||||| Sbjct 816 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 760 Query 324479 GAATCCCACCTCCGC 324493 |||| | |||||| Sbjct 759 AAATCACGTCTCCGC 745 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 || ||||||||| ||||||||| |||||||||||||||||||||||||| | ||||| Sbjct 1728 TGTGGAGTAGAGTAGTCTGGTATCTTGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 1672 Query 324479 GAATCCCACCTCCGC 324493 |||||| |||||| Sbjct 1671 AAATCCCGTCTCCGC 1657 >seq1518600 Length=921 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| Sbjct 357 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTC---ACAGGTTC 301 Query 324479 GAATCCCACCTCCGC 324493 |||||| |||||| Sbjct 300 AAATCCCGTCTCCGC 286 >seq964186 Length=2281 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478 |||||||||||| | |||||||||| ||||||||||||||||||||||| | ||||| Sbjct 1953 TGCGGAGTAGAGTATTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 1897 Query 324479 GAATCCCACCTCCGC 324493 |||||| |||||| Sbjct 1896 AAATCCCGTCTCCGC 1882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102989943906356