Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 161 2e-34
seq1506206 93.3 9e-14
seq3033322 89.7 1e-12
seq2525017 89.7 1e-12
seq2476118 89.7 1e-12
seq1244912 89.7 1e-12
seq2035815 86.0 1e-11
seq1545916 86.0 1e-11
seq2114724 84.2 5e-11
seq1518600 84.2 5e-11
seq964186 84.2 5e-11
>seq2065080
Length=53610
Score = 161 bits (178), Expect = 2e-34
Identities = 387/575 (67%), Gaps = 13/575 (2%)
Strand=Plus/Minus
Query 227028 TTTCTTCTGGACACCTGATGAGGTAGATTTATCTAAAGACCGAATAGATTTTAAATCACT 227087
||| || |||| |||||| || |||||||||||||||| |||||||||||| || | |
Sbjct 22955 TTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTT-AACAATT 22897
Query 227088 TACC-GATCACGAGAAGCACATATTTACTTCCAATCTAAAACGGCAAATTTTATTAGATT 227146
| || | || || || ||||| ||| ||| ||||| |||| ||| ||||||
Sbjct 22896 TGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATT 22837
Query 227147 CTGTTCAAGGTAGGGGTCCAAATTTAGTACTGTTGCCATATGCATCATTACCAGAACTTG 227206
| ||||||| || |||||||| ||| | ||||| || |||| |||| ||| | |
Sbjct 22836 CAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATCAATACCTGAATTAG 22777
Query 227207 AAAATTTTATTGAAACATGGTCATTTTTTGAAGGTTCTATACATAGTAAATCATATACAC 227266
||| | |||||||| |||||||||| |||| |||||||| | ||| ||||| |
Sbjct 22776 AAACATGGATTGAAACTTGGTCATTTTCTGAA---ACTATACATTCTCGATCTTATACTC 22720
Query 227267 ATATTATTCGAAATAT-ATATCCAAACCCAAGTGAAGTTTTTGATACTATGTTGGATATT 227325
|||| |||||||| || | | || || | || | ||||| ||| | |||
Sbjct 22719 ATATAATTCGAAACATAACAAATAATCCTTCATTAA-TATTTGAAGATATTATAAATA-A 22662
Query 227326 CCAGAAATTACATCAT-GTGCAACTGATATTTCAAAATATTATGATGATTTAGATAACTA 227384
||| | || | || | |||| |||||||| ||||| |||||||| | | ||
Sbjct 22661 CCAATCAATATCTAATAGAGCAAAAGATATTTCTTTTTATTACGATGATTTTATTCAATA 22602
Query 227385 TGGAACTTATTATAAGTTATTGGGTGAAGGCACTCACACCGTTAATGGTGAAAAAATTGT 227444
| || ||||| | ||||| || ||||| | ||| ||||| | |||||| |
Sbjct 22601 TACAAGTTATTGGCATTTATTAGGAGAAGGAATTCAACAAATTAATAATCAAAAAAAAAT 22542
Query 227445 TGTTGATATGTATGAGCTAAAGAAAAAACTATGGCTATGTATTAACAGTATTAATATTCT 227504
| || || | || | || |||||| ||| || ||| | | || | ||| | |
Sbjct 22541 TATTAATTTAAATTGTTTGAAAAAAAAATTATATCTCTGTTTAATGAGCGTAAATGCTTT 22482
Query 227505 AGAAGGTATTCGTTTTTATGTTTCATTTGCGTGTTCCTGGGCATACGCCG--AGAACAAT 227562
||||| |||| | |||||||| ||||| || || | || | || | ||| |||
Sbjct 22481 AGAAGCTATTAGATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTTGCTGAAAGAGAAAT 22422
Query 227563 CAACTTGAGGGGAATGCTAAAATAATTAGATTGAT 227597
| | || || ||||| ||||| ||| |||| ||
Sbjct 22421 TA--TGGAAGGAAATGCAAAAATCATTCGATTAAT 22389
Score = 98.7 bits (108), Expect = 2e-15
Identities = 476/744 (64%), Gaps = 30/744 (4%)
Strand=Plus/Minus
Query 224379 TCTTCCAACTCCAATTATGGCTGGACTACGTACTAACACTCGCCAATTTAGTTCTTGCGT 224438
||| ||||| || |||||||| || || | ||| ||| | |||||||| ||||| ||
Sbjct 24804 TCTACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGT 24745
Query 224439 AGTTAT-GAACGTTGGTGATAGTCTAGACAGCATTAGTGCTGGTAACAG----TGCTATA 224493
| || ||| || | ||||| | |||| |||| ||| ||||| | | |||
Sbjct 24744 TTTAATTGAATGT-GCTGATAATTTAGATTCTATTAATGC----AACAGCTAGTTCAATA 24690
Query 224494 ATGCAGTATATTTCTAAGAAAGCCGGTTTGGGAGTCAACTATGGTCGTGTCCGTGCAGTT 224553
| | ||| | ||| | | ||| || | ||| | || || | | ||||| ||
Sbjct 24689 GTAAAATATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTC 24630
Query 224554 GGTTCAGAAATTCGTGGTGGTGATGCTGTTCATACTGGATTGATTCCATTCCTACACGCA 224613
|| ||| | || || || || |||||||||| | || || ||| |||| ||
Sbjct 24629 GGAAGTCCTATTAGAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTC-TACAAACA 24571
Query 224614 GTTGCTAAAA-CTGTTAAATCTTGTTCTCAAGGTGGTGTGCGTGGTGGTGCAGCAACAGT 224672
|| | || |||||||||| || ||||||||||| || | || ||||| || || |
Sbjct 24570 TTTTCAAACTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCT 24511
Query 224673 CCACT-TCCCATTGTGGCATTACGAGTTTGAAGATCTTGTAGTACTAAAGAATAACAAAG 224731
| ||| ||| ||||||| || | || || | |||| |||| ||||| | ||
Sbjct 24510 GTTTTATCCTATT-TGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAG 24452
Query 224732 GTACAGAAGTATCTCGTGTTCGTCAGTTGGATTATTGTTTCCAAATTAATAAAACTTTCT 224791
| | ||||| ||| || | || | ||||| | | |||||||||||| || |
Sbjct 24451 GAATAGAAGATAATCGAGTAAGACATGTAGATTACGCTATACAAATTAATAAATTATTAT 24392
Query 224792 ATCAACGCTTGATTGAACGTAAAGATATTACTTTCTTCTCTCCAAGTGATGTTCCTGGTT 224851
||||| | || | | ||| | |||| ||| || ||| |||||||||| |
Sbjct 24391 ATCAAAGAATGTTATCTAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTAT 24332
Query 224852 TGTATGATGCATTCTGTGCAGACCAAGAAAAATTTGAAAAGCTATACACTAAGTATGAAG 224911
| ||||| || | | | |||||| |||||||||| | ||||| || ||||||
Sbjct 24331 TATATGAAAGTTTTTTTTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAA 24272
Query 224912 CTGATCCAAATATTCGTAAGA---AAACTATGCCAGCACTAGAAGTGTTCTCTCAACTAA 224968
||| ||| ||| || | ||| || | | || |||| | || ||| | | |
Sbjct 24271 AAGATAAAAAAATTAAAAAAAAAGAAATTAAGTC--CA-TAGATTTATTTTCTTTATTGA 24215
Query 224969 TGAATGAACGTTCTGAAACTGGACGTATCTATATCCAGAATATTGA-CTTAGTTAACGAA 225027
|| | || | || || ||| | |||||||| || ||| | || | | || ||
Sbjct 24214 TGCAAGAGAGAACTTCTACAGGAAGAATCTATATACAAAATGTAGATCATTGT-----AA 24160
Query 225028 CACTCA----CCATTTGATCCTTCAGTAGCTCCGATTGAACAAAGTAATCTATGTCAAGA 225083
||||| | |||||||| | ||||||| || |||| |||| |||||| ||
Sbjct 24159 TACTCATAGTTCTTTTGATCCAAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGA 24100
Query 225084 AATCGCACTACCTTCTGTGCCATT 225107
||| | ||||| || |||||
Sbjct 24099 AATAACTTTACCTACTAAACCATT 24076
>seq1506206
Length=1356
Score = 93.3 bits (102), Expect = 9e-14
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Plus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|| ||||||||| ||| |||||||| ||||||||||||||||||||||| || |||||
Sbjct 369 TGTGGAGTAGAGTAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 425
Query 324479 GAATCCCACCTCCGC---ATCCAATTTTAAGAAGTATATGGGGCTA 324521
||||||| |||||| | | || |||||||||| | || |||
Sbjct 426 AAATCCCATCTCCGCCAGACCAAAAGATAAGAAGTATTTTGGTCTA 471
>seq3033322
Length=123266
Score = 89.7 bits (98), Expect = 1e-12
Identities = 65/75 (87%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| | |||||
Sbjct 80002 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 80058
Query 324479 GAATCCCACCTCCGC 324493
|||||| ||||||
Sbjct 80059 AAATCCCGTCTCCGC 80073
>seq2525017
Length=144557
Score = 89.7 bits (98), Expect = 1e-12
Identities = 65/75 (87%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
||| |||||||| |||||||||||| |||||||||||||||||||||||| | |||||
Sbjct 55189 TGCAGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGCG---GGTTC 55133
Query 324479 GAATCCCACCTCCGC 324493
|||||| ||||||
Sbjct 55132 AAATCCCGTCTCCGC 55118
>seq2476118
Length=328616
Score = 89.7 bits (98), Expect = 1e-12
Identities = 84/106 (79%), Gaps = 6/106 (6%)
Strand=Plus/Plus
Query 324418 TTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTT 324477
|||| |||||||| |||||||||| | ||||||||||||||||||||||| || ||||
Sbjct 196260 TTGCAGAGTAGAGTAGTCTGGTAGATCGCAAGGCTCATAACCTTGAGGTCATG---GGTT 196316
Query 324478 CGAATCCCACCTCCGC---ATCCAATTTTAAGAAGTATATGGGGCT 324520
| ||||||| || ||| | | | |||||||||||| || ||
Sbjct 196317 CAAATCCCATCTTCGCCAGACCAGAAGATAAGAAGTATATTGGTCT 196362
>seq1244912
Length=1267
Score = 89.7 bits (98), Expect = 1e-12
Identities = 65/75 (87%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 332 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 276
Query 324479 GAATCCCACCTCCGC 324493
||||| ||||||
Sbjct 275 AAATCCTGTCTCCGC 261
>seq2035815
Length=42525
Score = 86.0 bits (94), Expect = 1e-11
Identities = 59/66 (89%), Gaps = 3/66 (5%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 16537 TGCGGAGTAGAGTAGTCTGGTAGCTAGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 16481
Query 324479 GAATCC 324484
|||||
Sbjct 16480 AAATCC 16475
>seq1545916
Length=1208
Score = 86.0 bits (94), Expect = 1e-11
Identities = 59/66 (89%), Gaps = 3/66 (5%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 320 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATG---GGTTC 264
Query 324479 GAATCC 324484
|||||
Sbjct 263 AAATCC 258
>seq2114724
Length=2508
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| | |||||
Sbjct 816 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 760
Query 324479 GAATCCCACCTCCGC 324493
|||| | ||||||
Sbjct 759 AAATCACGTCTCCGC 745
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|| ||||||||| ||||||||| |||||||||||||||||||||||||| | |||||
Sbjct 1728 TGTGGAGTAGAGTAGTCTGGTATCTTGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 1672
Query 324479 GAATCCCACCTCCGC 324493
|||||| ||||||
Sbjct 1671 AAATCCCGTCTCCGC 1657
>seq1518600
Length=921
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct 357 TGCGGAGTAGAGTAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTC---ACAGGTTC 301
Query 324479 GAATCCCACCTCCGC 324493
|||||| ||||||
Sbjct 300 AAATCCCGTCTCCGC 286
>seq964186
Length=2281
Score = 84.2 bits (92), Expect = 5e-11
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 324419 TGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTC 324478
|||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||
Sbjct 1953 TGCGGAGTAGAGTATTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTC 1897
Query 324479 GAATCCCACCTCCGC 324493
|||||| ||||||
Sbjct 1896 AAATCCCGTCTCCGC 1882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102989943906356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |