Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq2065080 226 6e-54 >seq2065080 Length=53610 Score = 226 bits (250), Expect = 6e-54 Identities = 1052/1632 (64%), Gaps = 71/1632 (4%) Strand=Plus/Minus Query 128438 TATGTTAAGAAGTTCTATGATGCTATTAGTACTTTTGATATTAGTTTACCAACTCCGATT 128497 ||| |||| || || ||||| |||||| ||||||| || | ||||||| |||||| Sbjct 24848 TATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATT 24789 Query 128498 ATGTCCGGTCTTCGCACTAATACACGTCAGTT---CTCAAGTTGTGTAGTACT-GAATGT 128553 ||| | ||| | | ||| ||| | || || ||| |||||| || | |||||| Sbjct 24788 ATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTC---TTGTGTTTTAATTGAATGT 24732 Query 128554 TGGCGATAGTCTTGATAGTATTGGTTCCAGTAATCATGCAATCCTGCGTTATATTTCACG 128613 | |||| | | ||| |||| | | | | | |||| | ||| | || | Sbjct 24731 -GCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCA 24673 Query 128614 TAAAGCAGGGCTTGGTGTTAATATGGGACGTATTCGTGCAATTGATTCTGCAATTCGTGA 128673 | |||||| |||| ||||| | || | |||||||| | | | | ||| | | Sbjct 24672 AAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGG 24613 Query 128674 TGGCGATGCAGTACATACTGGT-GTAGTACCATTCTTATCTGCATTAGCAAAAA-CTGTC 128731 || || ||| | ||||||||| ||| |||| |||| | |||| |||| |||| Sbjct 24612 AGGGGAAGCATTTCATACTGGTTGTA-TACCTTTCT-ACAAACATTTTCAAACTGCTGTT 24555 Query 128732 AAAAGCTGTTCCCAGGGAGGTGTAAGAGGCGGGGCAGCAACCGTACATTTTCCAATGTGG 128791 ||| ||| || || || || || ||||| || || || || | || ||| || ||| Sbjct 24554 AAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGG 24495 Query 128792 CATTTGGAATTTGAAAATATTGTAGTACTGAAAAATAATAAAGGAACTGAATTTAACCGA 128851 ||||| ||| | || ||| | |||| | |||||||||| ||||| ||| ||| ||| Sbjct 24494 CATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGA 24435 Query 128852 GTAAGACAACTGGACTATTGCT-TCCAAATCAATAAGACATTATATCAACGATTGATTGA 128910 |||||||| | || || ||| | ||||| ||||| |||||||||| || || | Sbjct 24434 GTAAGACATGTAGATTA-CGCTATACAAATTAATAAATTATTATATCAAAGAATGTTATC 24376 Query 128911 TGGAAAAGACATTACATTCTTTAGCCCACATGATGTTCCTGATCTATATGATGCATTTTG 128970 | ||||| | |||| || ||||| || |||||||||| ||||||| |||| Sbjct 24375 TAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTTTTT 24316 Query 128971 TGCTGATCAAGAAGAATTTGAACGTCTGTATATTAAGTATGAACTCGATGAAACTATTCG 129030 | |||| ||| | |||||||| || ||| | || |||||| ||| ||| ||| Sbjct 24315 TTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAATTAA 24256 Query 129031 TAGGA---AAACTATG-CCAGCGATTGAAGCATTTAGTCATCTAATACAAGAGCGTGCAG 129086 | | ||| || | ||| |||| | ||| | || | || |||||| | | Sbjct 24255 AAAAAAAGAAATTAAGTCCATAGATTTA---TTTTCTTTAT-TGATGCAAGAGAGAACTT 24200 Query 129087 AAACTGGCCGCATTTATATTCAGAATATTGATAATGCCAATGAGCATGGTTCATTTATTC 129146 || || | || ||||| || ||| | ||| || ||| ||| |||| ||| || Sbjct 24199 CTACAGGAAGAATCTATATACAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATC 24140 Query 129147 CAGAAATTGCACCAATTGAGCAAAGTAATTTGTGTCAGGAAATTGATTTACCATCTGTTC 129206 || |||| || || || ||| |||||| |||| |||||| |||||| || | Sbjct 24139 CAAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAAC 24080 Query 129207 CAT--TTGAAGATATTA-ATAATGGTGAAGGTCTTATTAGC-CTATGTACTTTGAGTGCT 129262 ||| | || || ||| |||| || || | |||| |||||||| | |||| Sbjct 24079 CATTATCTAATATTTTAGATAAAAATGGAG----AAATAGCATTATGTACTCTATCTGCT 24024 Query 129263 ATTAACTGGGGTAATTTTGACAAACCCGAAGATATGGAAGAAGCGTGTGATTTGGCTGTC 129322 | || | || || | | || |||| | || ||| | | |||| ||| Sbjct 24023 TTAAATTTAGGAAAAATAAAAAATATTAAAGAATTAGATGAATTATCTAATTTAATTGTA 23964 Query 129323 CGTGCCCTGGATGCTATTCTTGATTATCAGGATTATCCAGTACTACATGCTGAA---CGA 129379 |||||||| |||||| | | |||||||| || ||||| || || |||| || || Sbjct 23963 CGTGCCCTTGATGCTTTGTTAGATTATCAAGAATATCCTATAATAAGTGCTAAAATTGGA 23904 Query 129380 GC--TACAAAGCTCTACAGACCACTTGGTGTTGGTATTATGAGCCTAGCCTATTTCCTGG 129437 || || ||| ||| | | || || || ||| || | | || |||| || | Sbjct 23903 GCAATAGGAAG-----AAGAGCTATCGGAGTAGGAGTTACGAACTTTGCTTATTATCTTG 23849 Query 129438 CTAAACGTGGCTTAAAATA---CGATACAAACGC-----ATTGAACACTATTAACGAATG 129489 | ||| | | ||||| ||| || || | | ||||| || || | Sbjct 23848 CAAAAAATAATGTTAAATATTCTGATGGAAGTGCTAATAAATTAACAC-ATCAAACA--- 23793 Query 129490 GTCAGAAGCGTGGTCTTATTATTTGATTAAA-GCATCCGTAAACCTTGCAAAAGAAAAAG 129548 | ||||| |||||||| |||||| ||||| || || ||||||||||||| Sbjct 23792 -TTTGAAGCTATACAATATTATTT-ATTAAACGCATCTTGTAATCTAGCAAAAGAAAAAG 23735 Query 129549 GGCATTGTGATGGATTTAAGAATACTAAGTACTCACTGGGTTTATTCCCACATGACACTT 129608 | |||| | || ||| | || ||||| || | |||||| | ||| ||| |||| Sbjct 23734 GAACTTGTTCTTTATATAATCAAACAAAGTATTCGTTAGGTTTACTACCAATTGATACTT 23675 Query 129609 ATAAA--TCAGATTCATAT-ATCAATGAAATTGCACCATATGAATTAAAACAAGATTGGG 129665 ||||| | | ||| |||| || ||| | | ||||| || ||| |||| |||| Sbjct 23674 ATAAAAGTGAAATTGATATCAT--ATGCGA-CGAACCAT-TGCATTTAAAC-----TGGG 23624 Query 129666 ATTCCCTACGTGAAGAAATGATGGTGTATGGTATTCGTAATGCTACATTACATGCAAATA 129725 | | || | || |||| |||||| | | || ||||| || ||| | || Sbjct 23623 AATTTTTAAGAAAAAAAATATCAAAATATGGTTTAAGAAACTCTACACTATCTGCTATTA 23564 Query 129726 TGCCAGGAGAAACATCATCACAAATCAGTAATAGTACTGCTGGTATTGAAAAGATTCGTT 129785 |||| ||||||||| || ||||| ||| ||| ||| || || | | Sbjct 23563 TGCCTTCAGAAACATCTTCTCAAATATCAAATGCAACTAATGGAATAGAGCCTCCTAGAG 23504 Query 129786 CTCTTGTAACAGTAAAAACTTCTAAAGATGGTGTTCTTAAACAAGTTGTACCTGAAATTT 129845 || | | ||||| | |||||||||||| | |||||||||||||| || ||| | Sbjct 23503 GATTTATTAGTATAAAAGCATCTAAAGATGGTATGCTTAAACAAGTTGTTCCCGAATATA 23444 Query 129846 CAAAATTAAAGAACAAA-TATGACCTACTATGGGAACAATCTGATAATATTGGTTATCTT 129904 |||| |||| | |||| ||||| || ||||||| | | |||||||| || |||||| Sbjct 23443 AAAAACTAAA-ATCAAAGTATGAATTATTATGGGATATACCGGATAATATCGGATATCTT 23385 Query 129905 CAGGTGTGCGGCGTTATGCAGAAATATATGGATCAAGGTATAAGTACTAATACGAGTTAT 129964 | | || ||||||| |||| | | |||||| || ||||||||| | |||| Sbjct 23384 AAATTAGTTGGTATTATGCAAAAATTTGTTGATCAATCAATTTCTACTAATACTAATTAT 23325 Query 129965 AATCC-TGAAAAGTTCCAAGATGGAAAAGTGCCAATGTCAGTACTGTTAACAGAACTTCT 130023 |||| | |||| |||| |||||||||| | || ||| | || | ||| ||| | | Sbjct 23324 GATCCATCAAAATTTCC-AGATGGAAAAATTCCGATGAAATTATTACTAAAAGATTTATT 23266 Query 130024 AATGGCTTATAA 130035 || |||||||| Sbjct 23265 AACTGCTTATAA 23254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1063455747066864