Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_019526.1
Length=345809
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 226 6e-54
>seq2065080
Length=53610
Score = 226 bits (250), Expect = 6e-54
Identities = 1052/1632 (64%), Gaps = 71/1632 (4%)
Strand=Plus/Minus
Query 128438 TATGTTAAGAAGTTCTATGATGCTATTAGTACTTTTGATATTAGTTTACCAACTCCGATT 128497
||| |||| || || ||||| |||||| ||||||| || | ||||||| ||||||
Sbjct 24848 TATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATT 24789
Query 128498 ATGTCCGGTCTTCGCACTAATACACGTCAGTT---CTCAAGTTGTGTAGTACT-GAATGT 128553
||| | ||| | | ||| ||| | || || ||| |||||| || | ||||||
Sbjct 24788 ATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTC---TTGTGTTTTAATTGAATGT 24732
Query 128554 TGGCGATAGTCTTGATAGTATTGGTTCCAGTAATCATGCAATCCTGCGTTATATTTCACG 128613
| |||| | | ||| |||| | | | | | |||| | ||| | || |
Sbjct 24731 -GCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCA 24673
Query 128614 TAAAGCAGGGCTTGGTGTTAATATGGGACGTATTCGTGCAATTGATTCTGCAATTCGTGA 128673
| |||||| |||| ||||| | || | |||||||| | | | | ||| | |
Sbjct 24672 AAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGG 24613
Query 128674 TGGCGATGCAGTACATACTGGT-GTAGTACCATTCTTATCTGCATTAGCAAAAA-CTGTC 128731
|| || ||| | ||||||||| ||| |||| |||| | |||| |||| ||||
Sbjct 24612 AGGGGAAGCATTTCATACTGGTTGTA-TACCTTTCT-ACAAACATTTTCAAACTGCTGTT 24555
Query 128732 AAAAGCTGTTCCCAGGGAGGTGTAAGAGGCGGGGCAGCAACCGTACATTTTCCAATGTGG 128791
||| ||| || || || || || ||||| || || || || | || ||| || |||
Sbjct 24554 AAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGG 24495
Query 128792 CATTTGGAATTTGAAAATATTGTAGTACTGAAAAATAATAAAGGAACTGAATTTAACCGA 128851
||||| ||| | || ||| | |||| | |||||||||| ||||| ||| ||| |||
Sbjct 24494 CATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGA 24435
Query 128852 GTAAGACAACTGGACTATTGCT-TCCAAATCAATAAGACATTATATCAACGATTGATTGA 128910
|||||||| | || || ||| | ||||| ||||| |||||||||| || || |
Sbjct 24434 GTAAGACATGTAGATTA-CGCTATACAAATTAATAAATTATTATATCAAAGAATGTTATC 24376
Query 128911 TGGAAAAGACATTACATTCTTTAGCCCACATGATGTTCCTGATCTATATGATGCATTTTG 128970
| ||||| | |||| || ||||| || |||||||||| ||||||| ||||
Sbjct 24375 TAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTTTTT 24316
Query 128971 TGCTGATCAAGAAGAATTTGAACGTCTGTATATTAAGTATGAACTCGATGAAACTATTCG 129030
| |||| ||| | |||||||| || ||| | || |||||| ||| ||| |||
Sbjct 24315 TTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAATTAA 24256
Query 129031 TAGGA---AAACTATG-CCAGCGATTGAAGCATTTAGTCATCTAATACAAGAGCGTGCAG 129086
| | ||| || | ||| |||| | ||| | || | || |||||| | |
Sbjct 24255 AAAAAAAGAAATTAAGTCCATAGATTTA---TTTTCTTTAT-TGATGCAAGAGAGAACTT 24200
Query 129087 AAACTGGCCGCATTTATATTCAGAATATTGATAATGCCAATGAGCATGGTTCATTTATTC 129146
|| || | || ||||| || ||| | ||| || ||| ||| |||| ||| ||
Sbjct 24199 CTACAGGAAGAATCTATATACAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATC 24140
Query 129147 CAGAAATTGCACCAATTGAGCAAAGTAATTTGTGTCAGGAAATTGATTTACCATCTGTTC 129206
|| |||| || || || ||| |||||| |||| |||||| |||||| || |
Sbjct 24139 CAAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAAC 24080
Query 129207 CAT--TTGAAGATATTA-ATAATGGTGAAGGTCTTATTAGC-CTATGTACTTTGAGTGCT 129262
||| | || || ||| |||| || || | |||| |||||||| | ||||
Sbjct 24079 CATTATCTAATATTTTAGATAAAAATGGAG----AAATAGCATTATGTACTCTATCTGCT 24024
Query 129263 ATTAACTGGGGTAATTTTGACAAACCCGAAGATATGGAAGAAGCGTGTGATTTGGCTGTC 129322
| || | || || | | || |||| | || ||| | | |||| |||
Sbjct 24023 TTAAATTTAGGAAAAATAAAAAATATTAAAGAATTAGATGAATTATCTAATTTAATTGTA 23964
Query 129323 CGTGCCCTGGATGCTATTCTTGATTATCAGGATTATCCAGTACTACATGCTGAA---CGA 129379
|||||||| |||||| | | |||||||| || ||||| || || |||| || ||
Sbjct 23963 CGTGCCCTTGATGCTTTGTTAGATTATCAAGAATATCCTATAATAAGTGCTAAAATTGGA 23904
Query 129380 GC--TACAAAGCTCTACAGACCACTTGGTGTTGGTATTATGAGCCTAGCCTATTTCCTGG 129437
|| || ||| ||| | | || || || ||| || | | || |||| || |
Sbjct 23903 GCAATAGGAAG-----AAGAGCTATCGGAGTAGGAGTTACGAACTTTGCTTATTATCTTG 23849
Query 129438 CTAAACGTGGCTTAAAATA---CGATACAAACGC-----ATTGAACACTATTAACGAATG 129489
| ||| | | ||||| ||| || || | | ||||| || || |
Sbjct 23848 CAAAAAATAATGTTAAATATTCTGATGGAAGTGCTAATAAATTAACAC-ATCAAACA--- 23793
Query 129490 GTCAGAAGCGTGGTCTTATTATTTGATTAAA-GCATCCGTAAACCTTGCAAAAGAAAAAG 129548
| ||||| |||||||| |||||| ||||| || || |||||||||||||
Sbjct 23792 -TTTGAAGCTATACAATATTATTT-ATTAAACGCATCTTGTAATCTAGCAAAAGAAAAAG 23735
Query 129549 GGCATTGTGATGGATTTAAGAATACTAAGTACTCACTGGGTTTATTCCCACATGACACTT 129608
| |||| | || ||| | || ||||| || | |||||| | ||| ||| ||||
Sbjct 23734 GAACTTGTTCTTTATATAATCAAACAAAGTATTCGTTAGGTTTACTACCAATTGATACTT 23675
Query 129609 ATAAA--TCAGATTCATAT-ATCAATGAAATTGCACCATATGAATTAAAACAAGATTGGG 129665
||||| | | ||| |||| || ||| | | ||||| || ||| |||| ||||
Sbjct 23674 ATAAAAGTGAAATTGATATCAT--ATGCGA-CGAACCAT-TGCATTTAAAC-----TGGG 23624
Query 129666 ATTCCCTACGTGAAGAAATGATGGTGTATGGTATTCGTAATGCTACATTACATGCAAATA 129725
| | || | || |||| |||||| | | || ||||| || ||| | ||
Sbjct 23623 AATTTTTAAGAAAAAAAATATCAAAATATGGTTTAAGAAACTCTACACTATCTGCTATTA 23564
Query 129726 TGCCAGGAGAAACATCATCACAAATCAGTAATAGTACTGCTGGTATTGAAAAGATTCGTT 129785
|||| ||||||||| || ||||| ||| ||| ||| || || | |
Sbjct 23563 TGCCTTCAGAAACATCTTCTCAAATATCAAATGCAACTAATGGAATAGAGCCTCCTAGAG 23504
Query 129786 CTCTTGTAACAGTAAAAACTTCTAAAGATGGTGTTCTTAAACAAGTTGTACCTGAAATTT 129845
|| | | ||||| | |||||||||||| | |||||||||||||| || ||| |
Sbjct 23503 GATTTATTAGTATAAAAGCATCTAAAGATGGTATGCTTAAACAAGTTGTTCCCGAATATA 23444
Query 129846 CAAAATTAAAGAACAAA-TATGACCTACTATGGGAACAATCTGATAATATTGGTTATCTT 129904
|||| |||| | |||| ||||| || ||||||| | | |||||||| || ||||||
Sbjct 23443 AAAAACTAAA-ATCAAAGTATGAATTATTATGGGATATACCGGATAATATCGGATATCTT 23385
Query 129905 CAGGTGTGCGGCGTTATGCAGAAATATATGGATCAAGGTATAAGTACTAATACGAGTTAT 129964
| | || ||||||| |||| | | |||||| || ||||||||| | ||||
Sbjct 23384 AAATTAGTTGGTATTATGCAAAAATTTGTTGATCAATCAATTTCTACTAATACTAATTAT 23325
Query 129965 AATCC-TGAAAAGTTCCAAGATGGAAAAGTGCCAATGTCAGTACTGTTAACAGAACTTCT 130023
|||| | |||| |||| |||||||||| | || ||| | || | ||| ||| | |
Sbjct 23324 GATCCATCAAAATTTCC-AGATGGAAAAATTCCGATGAAATTATTACTAAAAGATTTATT 23266
Query 130024 AATGGCTTATAA 130035
|| ||||||||
Sbjct 23265 AACTGCTTATAA 23254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063455747066864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |