Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq2065080 105 1e-17 >seq2065080 Length=53610 Score = 105 bits (116), Expect = 1e-17 Identities = 368/569 (65%), Gaps = 13/569 (2%) Strand=Plus/Plus Query 119940 TTATTCTTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGTA 119999 ||||| || || || | || ||||| || || |||||||| ||||| ||| ||||||| Sbjct 24457 TTATTTTTTAAAACTAACAAATTCTCTACTTCTAAATGCCAAATAGGATAAAACAGAGTA 24516 Query 120000 GCAGAGCCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTTG 120059 |||| || || | | ||||||| || ||| ||||| ||||| || || || ||| Sbjct 24517 GCAGCACCTCCTCTAACTCCACCTTGAGAGCAGGATTTAACAGCAGTTTGAAAATGTTTG 24576 Query 120060 TAGAATGGGATTACGCCGGTATGGGTTGCTTCGCCGTTGCGAATTGGTGAACCCTCCGCA 120119 ||||| || || || ||||| |||||| || | ||| || || | ||| Sbjct 24577 TAGAAAGGTATACAACCAGTATGAAATGCTTCCCCTCCTCTAATAGGACTTCCGACAGCA 24636 Query 120120 CGAATAGCACCAGCATTAATACCAATACCAGCACGTTGACTGATATAACTAATAATAGAT 120179 ||||| || ||||||| ||||| || || | |||| | ||| | | || || Sbjct 24637 CGAATTTGCCCTACATTAATTCCAATTCCTGCTCTTTGAGATACATATTTTACTATTGAA 24696 Query 120180 GCAGACGTATCGTTAATAGATTTCAGAGAATCGCCGGATTCAATTTTCACACACGAACTA 120239 || || | |||||||| | | | ||| | |||||||| ||||| || ||| Sbjct 24697 CTAGCTGTTGCATTAATAGAATCTAAATTATCAGCACATTCAATTAAAACACAAGAGCTA 24756 Query 120240 AATTGGCGCGTTGGGGTGCGGGCACCACCCAAAATAGGGGTTGGGATTGAAATCTTAAAT 120299 ||||| | || || || | |||| ||| ||| || ||||| | || || |||| Sbjct 24757 AATTGCCTAGTAGGAGTTCTTACACCTGCCATAATCGGTGTTGGTAGAGATATTCTAAAA 24816 Query 120300 AGAGAAGCCGCATTATAATAATTGATTACGTGTTGAAGTCGGTTTACTTTT----TCACT 120355 |||| || | |||| | || | | | | | || ||| || | ||| Sbjct 24817 GTAGAAATAGCGTCATAAAATTTTTTAATATAATCTAATCTATTT--TTATGAGAATACT 24874 Query 120356 CTGATGTAGAGCCAT--AGCAATTCCCATATAAAGGAATTGGGGGGTTTCGTACA--TCT 120411 || | | ||| | ||| ||||| | ||||| || ||||||| | | | Sbjct 24875 TCGA-AAATAAACATGCTGAAATAAGAATATATAAAAATTGAGGACTTTCGTATATTTTT 24933 Query 120412 CCTTAGTTACTCTATTTCGTACCAAGTACTTTTCTTTTAACTGCATTGCACCAGCATATG 120471 ||| || || |||||| | || || || ||| ||| || || || || ||||||||| Sbjct 24934 CCT--GTAACCCTATTTTGAACTAAATATTTTCCTTCTAGTTGTTTTACAGCAGCATATG 24991 Query 120472 TAAAATTCATATCTCGGGAATGGTCAATA 120500 |||||||||||||| ||| |||||| Sbjct 24992 AAAAATTCATATCTCTATTATGATCAATA 25020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713336407705360