Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq3033322 91.5 2e-13 seq2104023 91.5 2e-13 seq2044814 91.5 2e-13 >seq3033322 Length=123266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| ||||| |||||| ||||||||||| | |||| || |||||||| Sbjct 32612 TTGGGATTGTAGTTCAATTGGT-TAGAGTACCGCCCTGTCAAGACGGAAGTTGCGGGTTC 32670 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 32671 GAGCCCCGTCAGTCC 32685 >seq2104023 Length=1876 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| |||||| ||||||||||| | |||| || ||||||||||| Sbjct 869 GGATTGTAGTTCAATTGGT-TAGAGTACCGCCCTGTCAAGACGGAAGTTGCGGGTTCGAG 811 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 810 CCCCGTCAGTCC 799 >seq2044814 Length=23393 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| ||||| |||||| ||||||||||| | |||| || |||||||| Sbjct 8 TTGGGATTGTAGTTCAATTGGT-TAGAGTACCGCCCTGTCAAGACGGAAGTTGCGGGTTC 66 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 67 GAGCCCCGTCAGTCC 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748146896831200