Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq2065080 192 6e-44 >seq2065080 Length=53610 Score = 192 bits (212), Expect = 6e-44 Identities = 303/434 (70%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 40424 TTTTATAACGCAATTTCCGATCGCAAACTGTCTCTACCGACTCCAATTATGGCGGGTGTA 40483 |||||| |||| ||||| | | | | |||||||| || || |||||||| |||||| Sbjct 24836 TTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGTGTA 24777 Query 40484 CGTACTCCTACGCGCCAGTTCTCCAGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGGT 40543 | |||||||| | || || | |||||| ||||||||| | |||| | | | | Sbjct 24776 AGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTAGAT 24717 Query 40544 TCTCTTAACGCTGTAACCTCTGCGATCGTGAAGTATATTTCACAACGTGCTGGTATTGGG 40603 ||| |||| || | | | | || || || ||| | || ||| | || || ||||| Sbjct 24716 TCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATTGGA 24657 Query 40604 GTTAACGCGGGACATATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCAT 40663 |||| | || || ||||| || | || | || | || || ||||| ||||| Sbjct 24656 ATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTTCAT 24597 Query 40664 ACTGGTGTGATTCCTTTCTGGAAACATATTCAAACCGCTGTTAAATCCTGTTCACAGGGT 40723 |||||| || ||||||| |||||| ||||||| |||||||||||||| || || ||| Sbjct 24596 ACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTCAAGGT 24537 Query 40724 GGCGTTCGTGGTGGTGCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAAC 40783 || ||| | || |||||||| || |||| ||||||| | |||||| | ||||| || || Sbjct 24536 GGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAGAGAAT 24477 Query 40784 CTTCTGGTGTTGAAGAACAACAAAGGCGTAGAAGAAAACCGCGTTCGTCATCTTGATTAT 40843 | | || || || || || | ||| ||||||| || || || | ||| | ||||| Sbjct 24476 TTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCGAGTAAGACATGTAGATTAC 24417 Query 40844 GGTGTACAGCTTAA 40857 | | |||| |||| Sbjct 24416 GCTATACAAATTAA 24403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536836421715760