Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2242544 120 1e-22 seq1870220 120 1e-22 seq2723061 111 8e-20 seq2503618 111 8e-20 seq1033036 111 8e-20 seq2416635 109 3e-19 seq933519 107 9e-19 seq674031 107 9e-19 seq2981091 96.9 2e-15 seq1994730 84.2 1e-11 seq1886602 84.2 1e-11 seq2039609 82.4 4e-11 seq1981992 82.4 4e-11 >seq2242544 Length=4788 Score = 120 bits (132), Expect = 1e-22 Identities = 148/201 (74%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||||| | ||| | ||| |||| | ||| | || || ||||||| || Sbjct 2287 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTATTTTCTTCCTT 2228 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| |||||||| ||||| || Sbjct 2227 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTGCATGCCATGGATCTAATTA 2169 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || | ||| ||| || || ||||||||||||||||| || |||| ||||| ||||| Sbjct 2168 CATGGAAAAGGCACCCTTACTCTTTCCTCCACCTTGATCAACATATCGAGCAGTATCATT 2109 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 2108 GAATACCCTCAACATTGGCAC 2088 >seq1870220 Length=168078 Score = 120 bits (132), Expect = 1e-22 Identities = 148/201 (74%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||||| | ||| | ||| |||| | ||| | || || ||||||| || Sbjct 42724 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTATTTTCTTCCTT 42665 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| |||| |||||||| ||||| || Sbjct 42664 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTACATGCCATGGATCTAAGTA 42606 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| |||||| || || |||||||||||||| || |||| ||||| ||||| Sbjct 42605 CATGGCAAAGGCACCTTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAGTATCATT 42546 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 42545 GAATACCCTCAACATTGGCAC 42525 >seq2723061 Length=1725 Score = 111 bits (122), Expect = 8e-20 Identities = 146/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | | ||| | ||| | ||| |||| | ||| | || || ||||||| || Sbjct 84 CATAAAGAGTTATGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 143 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| |||||||| ||||| || Sbjct 144 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTGCATGCCATGGATCTAAGTA 202 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| ||| || || || |||||||||||||| || |||| ||||| ||||| Sbjct 203 CTTGGCAAAGACACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAGTATCATT 262 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 263 GAATACCCTCAACATTGGCAC 283 >seq2503618 Length=99574 Score = 111 bits (122), Expect = 8e-20 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||||| | ||| | ||| |||| | ||| | || || ||| ||| || Sbjct 77304 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTATTCCTT 77245 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| || ||||| ||||| || Sbjct 77244 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAACATCTGCATGACATGGCTCTAAGTA 77185 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| ||| || || || |||||||||||||| || ||| ||||| ||||| Sbjct 77184 CATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCAACATATTGAGCAGTATCATT 77125 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 77124 GAATACCCTCAACATTGGCAC 77104 >seq1033036 Length=1205 Score = 111 bits (122), Expect = 8e-20 Identities = 146/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | | ||| | ||| | || |||| | ||| | || || ||||||| || Sbjct 815 CATAAAGAGTTTTGGCACCCAAAGCACAAAAAACATATCACATGCCCTGTTTTCTTCCTT 874 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| |||||||| ||||| || Sbjct 875 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTGCATGCCATGGATCTAAGTA 933 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| ||| || || || |||||||||||||| || |||| ||||| ||||| Sbjct 934 CATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCCACATATCGAGCAGTATCATT 993 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 994 GAATACCCTCAACATTGGCAC 1014 >seq2416635 Length=260445 Score = 109 bits (120), Expect = 3e-19 Identities = 143/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||||| | ||| | ||| |||| | ||| | || || ||||||| || Sbjct 258535 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTATTTTCTTCCTT 258594 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| |||||||| ||||| || Sbjct 258595 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTGCATGCCATGGATCTAAGTA 258653 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| | | || || || ||||||||||| || || |||| ||||| ||||| Sbjct 258654 CATGGCAAAGGCAGCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTATCATT 258713 Query 26113 GAAAACTTTCAACATTG 26129 ||| || ||||||||| Sbjct 258714 GAATACCCTCAACATTG 258730 >seq933519 Length=1040 Score = 107 bits (118), Expect = 9e-19 Identities = 145/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||||| | ||| | ||| |||| | ||| | || || ||||||| || Sbjct 802 CATAAAGAGTTCTGGTACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 861 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||| | ||||| |||||||| | ||| || Sbjct 862 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAACA-ATCTGCATGCCATGGATATAAGTA 920 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||| ||| || || || |||||||||||||| || |||| ||| | ||||| Sbjct 921 CATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAATATCATT 980 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 981 GAATACCCTCAACATTGGCAC 1001 >seq674031 Length=1931 Score = 107 bits (118), Expect = 9e-19 Identities = 145/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | || | | ||| | |||| |||||| ||| | || || ||||||| || Sbjct 1395 CATAAAGATTCCTAGCACCCAAAGTGCAAAAAATAGATCACATGCCCTGTTTTCTTCCTT 1454 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || ||||| | | || | || ||||||| ||||| |||||||| ||||| || Sbjct 1455 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAA-ATCTGCATGCCATGGATCTAAGTA 1513 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || | ||| ||| || || || |||||||||||||| | |||| | ||| ||||| Sbjct 1514 CATGGAAAAGGCACCCTTCCTCTTACCTCCACCTTGATCAAAATATCGAGTAGTATCATT 1573 Query 26113 GAAAACTTTCAACATTGGAAC 26133 ||| || |||||||||| || Sbjct 1574 GAATACCCTCAACATTGGCAC 1594 >seq2981091 Length=351938 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 ||||| | ||| | |||| |||| | ||| | || | ||||||| || | || ||| Sbjct 339060 TCTGGCACCCAAAGTGCAAAAAACAGATCACGTGCCATGTTTTCTTCCTTCCTATGGTTC 339119 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 || | || | || ||||||| ||||| |||||||| ||||| || || | ||| Sbjct 339120 TTCCCCAACTCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATGGAAAAG 339179 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 ||| || || || |||||||||||||| || |||| | || |||||||| || || Sbjct 339180 GCACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGAAGAATCATTGAATACCCTC 339239 Query 26123 AACATTGGAAC 26133 |||||||| || Sbjct 339240 AACATTGGCAC 339250 >seq1994730 Length=131235 Score = 84.2 bits (92), Expect = 1e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 ||||| ||| |||| ||||| || ||||| || || | |||||| ||| ||||||||| Sbjct 119416 TTTGATGTGTATGGCTCAAAGCACTCATTGTTCCCAAGAATTTGACTAGTTGATGCTGTT 119475 Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168 ||||| || || | ||| |||||||||| ||||| ||| ||| | ||| |||| Sbjct 119476 GGCATAGGAGCAATAAGTAGAGAATTTCTCACACCATTTTTTGCAACCATTTGCCTTAAG 119535 Query 25169 TTATCCCAATC 25179 | ||||||| Sbjct 119536 GCAGCCCAATC 119546 >seq1886602 Length=15129 Score = 84.2 bits (92), Expect = 1e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 ||||| ||| |||| ||||| || ||||| || || | |||||| ||| ||||||||| Sbjct 11805 TTTGATGTGTATGGCTCAAAGCACTCATTGTTCCCAAGAATTTGACTAGTTGATGCTGTT 11864 Query 25109 GGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168 ||||| || || | ||| |||||||||| ||||| ||| ||| | ||| |||| Sbjct 11865 GGCATAGGAGCAATAAGTAGAGAATTTCTCACACCATTTTTTGCAACCATTTGCCTTAAG 11924 Query 25169 TTATCCCAATC 25179 | ||||||| Sbjct 11925 GCAGCCCAATC 11935 >seq2039609 Length=60358 Score = 82.4 bits (90), Expect = 4e-11 Identities = 169/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAAC-TTTCTC--CATAAATAAATC 25944 ||| ||||| || || ||| || ||| |||| || ||||| |||||| | | Sbjct 11456 ATTGGGACAAAACAATGACCATGTAGAATTCTGCTGGACCTTTCTTTTCATAAAGAGGTA 11515 Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004 ||| | ||| | || |||| | ||| | || | ||||||| || || || ||||| Sbjct 11516 TGGCACCCAAAGCACAAAAAACAGATCACGTGCCATGTTTTCTTCCTTCCCATGGTTCTT 11575 Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACT 26064 | | || | || ||||||| || || ||||||| ||||| || || | ||| Sbjct 11576 CCTCAACTCCAGAAACTCAAAAACATATGCATGCCATGTCTCTAAGTACATGGAAAAGGC 11635 Query 26065 ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAA 26124 ||| || | || |||||||||||||| |||| ||| | |||||||| || |||| Sbjct 11636 ACCCTTCTTCTTGCCTCCACCTTGATCACAATATCGAGCAATATCATTGAATACCCTCAA 11695 Query 26125 CATTGGAAC 26133 |||||| || Sbjct 11696 CATTGGCAC 11704 >seq1981992 Length=52047 Score = 82.4 bits (90), Expect = 4e-11 Identities = 169/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAAC-TTTCTC--CATAAATAAATC 25944 ||| ||||| || || ||| || ||| |||| || ||||| |||||| | | Sbjct 7351 ATTGGGACAAAACAATGACCATGTAGAATTCTGCTGGACCTTTCTTTTCATAAAGAGGTA 7410 Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004 ||| | ||| | || |||| | ||| | || | ||||||| || || || ||||| Sbjct 7411 TGGCACCCAAAGCACAAAAAACAGATCACGTGCCATGTTTTCTTCCTTCCCATGGTTCTT 7470 Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACT 26064 | | || | || ||||||| || || ||||||| ||||| || || | ||| Sbjct 7471 CCTCAACTCCAGAAACTCAAAAACATATGCATGCCATGTCTCTAAGTACATGGAAAAGGC 7530 Query 26065 ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAA 26124 ||| || | || |||||||||||||| |||| ||| | |||||||| || |||| Sbjct 7531 ACCCTTCTTCTTGCCTCCACCTTGATCACAATATCGAGCAATATCATTGAATACCCTCAA 7590 Query 26125 CATTGGAAC 26133 |||||| || Sbjct 7591 CATTGGCAC 7599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243685462451150