Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2049698 118 1e-21 seq2002493 107 2e-18 seq1994730 98.7 1e-15 seq1886602 98.7 1e-15 seq1869705 96.9 4e-15 seq1522372 84.2 3e-11 >seq2049698 Length=133754 Score = 118 bits (130), Expect = 1e-21 Identities = 293/442 (66%), Gaps = 2/442 (0%) Strand=Plus/Minus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 || || || || ||| |||| ||||| | | || || ||| || || || ||| Sbjct 11618 GTTGAGTTCCTGAAGAAACCAGAGAGGTTTACTGCAATTGGAGCTCGTATTCCTAAAGGA 11559 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | ||||| | |||| ||||| || || ||||| | || ||| ||||| || || Sbjct 11558 GTTCTTCTTGTGGGTCCACCAGGGACTGGGAAGACTTTGCTAGCCAAGGCCATTGCAGGG 11499 Query 175357 GAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGT 175416 ||| | ||| || ||| || ||| | | | ||||| ||||||||||| ||| Sbjct 11498 GAAGCTGGTGTACCCTTCTTCTCTATCTCAGGGTCTGAGTTTGTTGAGATGTTTGTCGGT 11439 Query 175417 GTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATT 175476 | || || || || || || || || ||| ||| |||||| || || ||| Sbjct 11438 ATCGGAGCATCTAGAGTGCGTGACCTGTTCAAAAAGGCCAAAGAAAATGCCCCTTGCATT 11379 Query 175477 GTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATG-CCAGC 175535 || ||| | ||||| |||||||| || || | ||| | | |||| || | || Sbjct 11378 GTTTTCGTCGATGAAATTGATGCAGTTGGTAGGCAGAGAGGAACTGG-AATAGGTGGAGG 11320 Query 175536 AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAA 175595 |||||| ||| |||||||||| | ||||| || || || || |||||||| ||||| Sbjct 11319 AAATGATGAGCGAGAACAAACCCTGAATCAGCTTCTTACAGAAATGGATGGTTTTGAAGG 11260 Query 175596 TGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCT 175655 | ||||| || | || ||||| || || || | | ||||| ||||||| || | Sbjct 11259 GAACACTGGTATCATTGTGATTGCTGCAACCAACAGGGCTGATATACTTGATGCTGCTTT 11200 Query 175656 CCTTCGCCCGGGTCGTTTTGAT 175677 | ||||| || ||||||||| Sbjct 11199 GTTGCGCCCAGGGCGTTTTGAT 11178 >seq2002493 Length=19711 Score = 107 bits (118), Expect = 2e-18 Identities = 228/331 (69%), Gaps = 22/331 (7%) Strand=Plus/Minus Query 177592 GTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACA 177651 || || |||||||| ||||| | || ||||| || | ||| | |||||| || || ||| Sbjct 12693 GTGGCAACAACATAGTCATCGGGCTTATCTTGCTGCACCATCAACCACATTGCCTCCACA 12634 Query 177652 TAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCT 177711 |||||| ||| ||||| || |||| || ||||| || || | | || || | Sbjct 12633 TAGTCCCCAGCAAATCCCCAATCCCTGGAGGCCTTGAGATTGCCCAAATACAGCTTCT-T 12575 Query 177712 CTCTCACCTTTCACAATTTGTTTGACGCCATCAG------TAATCTTCTTTGTGACAAAG 177765 || || || | |||| || | ||| ||| | |||||| ||||||||||| Sbjct 12574 CTGAAGCC---CA-ATTTTGATTCTCCCCA-CAGCCCTGGTGATCTTCCTTGTGACAAAG 12520 Query 177766 TCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCA 177825 | |||||| || || || ||||||||||||||||| || ||||||| |||| ||| Sbjct 12519 TTCTCACCTCTCCTTGGGGACTCGTGGTTGAAGAGGATCCCATTGCAGGCAAACATTCCA 12460 Query 177826 TAGGATTCTCGGTAATTTTTGAC-GA--GCCAGTGAGCGGCCAATTTGGAGACGCCATA- 177881 || | |||| ||| ||||| || ||| || || || | |||||||| |||| Sbjct 12459 TATGCCTCTCTGTA---GTTGACAGAATACCAATGGGCTGCAAGCTTGGAGACAGCATAA 12403 Query 177882 -GACGGATCGTGGGTAGAAGGGTGTCTCCTC 177911 ||| || ||||| |||||| || | ||| Sbjct 12402 GGAC--TTCTTGGGTGGAAGGGGGTGTTCTC 12374 >seq1994730 Length=131235 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 ||||| | || |||| ||||| || || |||||||||||||||||||| ||||||| Sbjct 120650 AGGATTCATGCAACAGAAAGAGCAATCAGCAGAATTTGGGAACAATCAAGTCTTCAAATC 120591 Query 75993 TTTGCACGGAAATTTTAGAGTACAC-AGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 ||||||| |||||| | |||||||| || | | || | || ||||| ||||||||| Sbjct 120590 TTTGCACAGAAATTATTGAGTACACTAGCCCAACA-GAAAGTGCAGTTTGTAATTTGGCA 120532 Query 76052 TCAATCGCCCTTCCAA 76067 ||| | || || |||| Sbjct 120531 TCACTTGCTCTGCCAA 120516 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 76119 TCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTG 76178 ||||| || ||||| |||| || ||| | ||||||| |||| ||||| || | Sbjct 120168 TCACATCAATAGTTACTCAAAACCTGAACAAAATCATTGATGTGAATTACTATCCTGTAG 120109 Query 76179 AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCG 76238 | ||||| |||| |||||||| |||||||||||||| | |||||||| || || | Sbjct 120108 AAACTGCAAAGCAGTCAAATATGCGTCACAGACCTATTGGCATTGGTGTTCAGGGCCTTG 120049 Query 76239 CGGATGTATTTATTTTGTGCCGCTACG-CATTTGATTCAGATGA 76281 | ||| |||||||||| | || | ||||||| ||||| || Sbjct 120048 CTGATACATTTATTTTG-CTTGGTATGCCATTTGACTCAGAAGA 120006 >seq1886602 Length=15129 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 ||||| | || |||| ||||| || || |||||||||||||||||||| ||||||| Sbjct 13039 AGGATTCATGCAACAGAAAGAGCAATCAGCAGAATTTGGGAACAATCAAGTCTTCAAATC 12980 Query 75993 TTTGCACGGAAATTTTAGAGTACAC-AGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 ||||||| |||||| | |||||||| || | | || | || ||||| ||||||||| Sbjct 12979 TTTGCACAGAAATTATTGAGTACACTAGCCCAACA-GAAAGTGCAGTTTGTAATTTGGCA 12921 Query 76052 TCAATCGCCCTTCCAA 76067 ||| | || || |||| Sbjct 12920 TCACTTGCTCTGCCAA 12905 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 76119 TCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTG 76178 ||||| || ||||| |||| || ||| | ||||||| |||| ||||| || | Sbjct 12557 TCACATCAATAGTTACTCAAAACCTGAACAAAATCATTGATGTGAATTACTATCCTGTAG 12498 Query 76179 AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCG 76238 | ||||| |||| |||||||| |||||||||||||| | |||||||| || || | Sbjct 12497 AAACTGCAAAGCAGTCAAATATGCGTCACAGACCTATTGGCATTGGTGTTCAGGGCCTTG 12438 Query 76239 CGGATGTATTTATTTTGTGCCGCTACG-CATTTGATTCAGATGA 76281 | ||| |||||||||| | || | ||||||| ||||| || Sbjct 12437 CTGATACATTTATTTTG-CTTGGTATGCCATTTGACTCAGAAGA 12395 >seq1869705 Length=65823 Score = 96.9 bits (106), Expect = 4e-15 Identities = 187/275 (68%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||| | ||||||||||| || || || ||| |||||||| ||||| || | | || Sbjct 20376 TTTATAGAGATGTTTGTAGGAGTAGGAGCCTCTAGGGTTCGTGATCTTTTCAAGAGGGCA 20317 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 |||||| ||| |||||| | ||||| ||||| | ||||| ||||| | ||| | Sbjct 20316 AAGGAAAATGCACCTTGTATTATTTTCATAGATGAACTCGATGCAGTGGGAAGGCAGAGG 20257 Query 175516 AGCGCTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTC 175572 | || || |||| || ||||| || ||||||| ||| | || ||| | || Sbjct 20256 GGAGCAGGAATTGGT---GGAGGCAATGATGAACGAGAACAGACATTGAACCAATTGCTT 20200 Query 175573 ACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGC 175632 || ||||||||||| ||||| | ||||| | | || || || || || ||||| Sbjct 20199 ACTGAGATGGATGGATTTGAAGGGAACACTGGAGTGATTGTCATCGCAGCTACCAATCGA 20140 Query 175633 GTGGATATCCTTGATGACGCCCTCCTTCGCCCGGG 175667 || ||| | || |||| || | ||||| || || Sbjct 20139 GTTGATGTGCTGGATGCAGCTTTACTTCGGCCTGG 20105 >seq1522372 Length=1257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 184/273 (67%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559 || || |||||||| ||| |||||||| | |||||| | | ||||| || | || Sbjct 533 CGAGGAACAAATGGCACATCCAATGGTATTGTGCCAATGTTGAGGGTATTCAATGATACT 474 Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGA 75615 || || ||||| |||||| | |||| | | ||||| ||| | || | ||||| || Sbjct 473 GCTCGATATGTTGATCAAG-GCGGCGGCAAGAGGAAGGGTTCCTTTGCCATGTACTTAGA 415 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 ||||||||||| ||| | | ||||| || ||||| | ||||| || | ||||| Sbjct 414 TCCATGGCATGCAGAT-TTTTTGAGTTTCTGGAGTTGAGGAAGAACCATGGGAAGGAAGA 356 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 || | ||||| |||| | || ||| | ||||| || || ||||| |||| Sbjct 355 AAACAGGGCATGTGATCTGTTTTTTGCGCTTTGGGTGCCAGAACTCTTTATGAAAAGGGT 296 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC 75768 ||||| | | ||||||| | || ||||| Sbjct 295 CTAGGAGAATTCTAAATGGTCATTGTTTTGTCC 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573949753847360