Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_021073.1
Length=107218
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 167 2e-36
>seq2065080
Length=53610
Score = 167 bits (184), Expect = 2e-36
Identities = 603/941 (64%), Gaps = 57/941 (6%)
Strand=Plus/Minus
Query 10935 AAACAAAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCC 10994
||| |||||| || | || | || || ||||| || || ||| ||||||| | |||
Sbjct 23070 AAAAAAAAAATGATCCTTTGCAAGAACCAATGTTTTTTGGACAACCAGTTAATATTTCCA 23011
Query 10995 GTTACGACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCT 11054
| || || ||||| ||| || ||||||| ||| ||| | || ||||| || || |
Sbjct 23010 GATATGATCAACAAAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTTCTTTTT 22951
Query 11055 TCTGGCGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACTACAGTAAAATGACTG 11114
| ||| | || |||||| | ||| | || |||| ||||| || | | || || |
Sbjct 22950 TTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATTTGCCAA 22891
Query 11115 ATGCGGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACATTACTCGACTCGATCC 11174
| || |||||||| || | ||||| | || || ||||| ||||| || || || |
Sbjct 22890 AACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATTCAATTC 22831
Query 11175 AAGGCCGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACTT 11234
|||| | || || ||||| || || ||||| |||| ||| |||| ||| | ||||| |
Sbjct 22830 AAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATCAATACCTGAATTAGAAACAT 22771
Query 11235 GGGTAGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCATACACACACATCATTC 11294
|| | ||||| ||| || ||||| || || ||||| || || || || || ||||
Sbjct 22770 GGATTGAAACTTGGTCATTTTCTGAAACTATACATTCTCGATCTTATACTCATATAATTC 22711
Query 11295 GCAATATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATC- 11353
| || || ||| | ||| | | || || ||| || | ||||| || |||
Sbjct 22710 GAAACATAACAAATAATCCTTCATTAATATTTGAAGATATTATA---AATAACCA-ATCA 22655
Query 11354 ----CTAGAGCGAGCTAAAGATATTGCTCGTTACTACGACGATCTCATC----------- 11398
||| | |||| ||||||||| || ||| ||||| ||| | ||
Sbjct 22654 ATATCTA-ATAGAGCAAAAGATATTTCTTTTTATTACGATGATTTTATTCAATATACAAG 22596
Query 11399 ---TTGGCATGCA--AAGAGCATGAGCTAAACGG---------CAAACACACAATGCGCG 11444
||||||| | | ||| | || | ||| |||| | | |||
Sbjct 22595 TTATTGGCATTTATTAGGAGAAGGAATTCAACAAATTAATAATCAAAAAAA-AATTATTA 22537
Query 11445 ACCTAAAG---------AAAAAGTTGTACTTGTGCATGATGGCTGTTAATGTATTAGAAG 11495
| |||| ||||| || || | || | ||| || |||| |||||||
Sbjct 22536 ATTTAAATTGTTTGAAAAAAAAATTATATCTCTGTTTAATGAGCGTAAATGCTTTAGAAG 22477
Query 11496 CAGTTCGTTTCTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCGAGATTATGG 11555
| || | || || || ||||| ||||| |||||||| || |||||| | || |||||||
Sbjct 22476 CTATTAGATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTTGCTGAAAGAGAAATTATGG 22417
Query 11556 AAGGTAATGCTAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACCAAAGCGGTA 11615
|||| ||||| |||||||| | || || | ||||||||| |||| || |||
Sbjct 22416 AAGGAAATGCAAAAATCATTCGATTAATAGCAAGAGATGAAGCATTACATTTAACTAGTA 22357
Query 11616 CACAGCACATGCTGAAGATGT---GGAACAACGGCACCGATGATATGGAAATGGCTTCTA 11672
| || || || | || || | ||||| | | |||| | | |||||| ||
Sbjct 22356 CTCAACATATAATTAATATTTTACAAAACAAAGAAAATAATGAAA---ATATGGCTAATA 22300
Query 11673 TCGCACATGAGTGTCGCGAAGAGTCAA---TCGAAATATTCAAGATGGCCGAAGAACAAG 11729
| | | || | || |||| || | |||| || | || | |||||||
Sbjct 22299 TTACTAAAGAAT---GCAAAGATGAAAGTTTTAAAATTTTTTTAAACGCTGCTGAACAAG 22243
Query 11730 AGAAAGACTGGGCAAACTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAGATA 11789
||||| | ||||| | ||| |||| |||||| |||| | ||| |||| ||||| |
Sbjct 22242 AGAAAAAATGGGCTGAATATTTATTTTCTGATGGTTCTATGCTAGGATTAAATAAAGAAA 22183
Query 11790 TTCTATGTGAATATGTTGAGTACATCACAAGCCACCGAATG 11830
|| ||||| ||||| |||| || || |||| | | |||||
Sbjct 22182 TTTTATGTCAATATATTGAATATATTACAAACATCAGAATG 22142
Score = 161 bits (178), Expect = 7e-35
Identities = 1008/1601 (63%), Gaps = 26/1601 (2%)
Strand=Plus/Minus
Query 9198 GACTACAATACATCAAAGAATTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCCGA 9257
|| || | || || ||| |||| ||||| || || ||| ||| || || || |
Sbjct 24856 GATTAGATTATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAA 24797
Query 9258 CACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCG 9317
|||| || ||| | ||||| | || || || | ||||| ||||| || || ||| |
Sbjct 24796 CACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTG 24737
Query 9318 AAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTT 9377
|| | | ||||| || | || || ||||||||| | | |||| || | || || |
Sbjct 24736 AATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTAT 24677
Query 9378 CACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTC 9437
| || | ||||| ||||| ||||| | || | || || || | || | |||
Sbjct 24676 CTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTA 24617
Query 9438 GTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAG 9497
| || || ||||| | |||||||||||||| || ||||||||||| || ||||| || |
Sbjct 24616 GAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTG 24557
Query 9498 TGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGT 9557
| |||| || ||||| || ||| | || || || || || | || || || || |
Sbjct 24556 TTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTT 24497
Query 9558 GGCACCTAG-AGTACA-AATCACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAA 9615
|||| ||| |||| | ||| | | || | || || || | || || ||||| ||
Sbjct 24496 GGCATTTAGAAGTAGAGAAT--TTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAA 24439
Query 9616 CCGTGTACGTCATATGGACTACGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCT 9675
|| ||| | ||| | || |||| | ||||||||||| | | ||| | | || |
Sbjct 24438 TCGAGTAAGACATGTAGATTACGCTATACAAATTAATAAATTATTATATCAAAGAATGTT 24379
Query 9676 GTCTGGTCAGAACATCACTTTATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATA 9735
||| | | || || | |||||| ||| | ||| || |||| || |
Sbjct 24378 ATCTAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTT 24319
Query 9736 CTTCGAAGACCAAGATAAGTTCGAGCGACTGTACACCAAAGCGGAATCTGATCCATCAAT 9795
|| |||||| || || || ||| || ||| ||| ||| | |||
Sbjct 24318 TTTTTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAAT 24259
Query 9796 CGAAAAAGACACAATCTCTGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTC 9855
||||| | ||| | | || ||| || | ||||||||| | ||||
Sbjct 24258 TAAAAAAAAAGAAATTAAGTCCATAGATTTATTTTCTTTATTGATGCAAGAGAGAACTTC 24199
Query 9856 TACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTCGATGA 9915
|||||| | ||||| || || | |||||||| ||||| | | | || |||| |||
Sbjct 24198 TACAGGAAGAATCTATATACAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATCC 24139
Query 9916 GCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCAAACC 9975
| || || | | ||||| || ||||| ||||||| | |||| || |||||
Sbjct 24138 AAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAACC 24079
Query 9976 GTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAA 10035
|| ||| | ||| |||| ||| | || |||||||||||||||| || ||
Sbjct 24078 ATTATCTAATATTTTAGATAAAAATGGAGAAATAGCATTATGTACTCTATCTGCTTTAAA 24019
Query 10036 CTTGGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTCGTATCGTTGTGCGTGC 10095
|| || || || || || || || || | ||| | | |||| |||||
Sbjct 24018 TTTAGGAAAAATAAAAAATATTAAAGAATTAGATGAATTATCTAATTTAATTGTACGTGC 23959
Query 10096 ATTGGATAATCTGTTAGACTACCAAAACTACCC---ATTACCTGCCGCAGAACGTTCGA- 10151
| ||| | ||||||| || ||| | || || | || ||| || || ||
Sbjct 23958 CCTTGATGCTTTGTTAGATTATCAAGAATATCCTATAATAAGTGC----TAAAATTGGAG 23903
Query 10152 CAATGCGCAGACGTAGC-CTTGGTGTAGGTATTATCAATTACGCCCACTGGGTGGCTAAG 10210
|||| | ||| | ||| | || ||||| ||| || | || | | | || ||
Sbjct 23902 CAATAGGAAGAAG-AGCTATCGGAGTAGGAGTTACGAACTTTGCTTATTATCTTGCAAAA 23844
Query 10211 AATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGAGCTGATTGAAGCT 10270
||| | ||||| ||| || || || || || || ||| | ||||||||
Sbjct 23843 AATAATGTTAAATATTCTGATGGAAGTGCTAATAAATTAACACATCAAACATTTGAAGCT 23784
Query 10271 ATGCAGTTCTACTTGCTACAAGCATCAATGGAA-CTGGCTAAAGAGAAGGGTATGTGTTC 10329
|| || | || || || | ||||| || || || || ||||| || || | |||||
Sbjct 23783 ATACAATATTATTTATTAAACGCATC-TTGTAATCTAGCAAAAGAAAAAGGAACTTGTTC 23725
Query 10330 TGGATTCGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGATCGTTATAAGTCTGA 10389
| || | | || |||||| | |||| | | ||| ||||| |||||| |||
Sbjct 23724 TTTATATAATCAAACAAAGTATTCGTTAGGTTTACTACCAATTGATACTTATAAAAGTGA 23665
Query 10390 TGTCGACAACACCCACACAGCAGAACTACAGATGAATTGGAATTGGTTGCGTAATGAGAT 10449
| || | || | | | | | || | || ||| | | || | || | |
Sbjct 23664 AATTGATATCATATGCGACGAACCATTGCATTTAAACTGGGAATTTTTAAG-AAAAAAAA 23606
Query 10450 TGTCCATA-ATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTT 10508
| || | | |||| || | |||||||| |||||||| | |||||||| ||||||||||
Sbjct 23605 TATCAAAATATGGTTTAAGAAACTCTACACTATCTGCTATTATGCCTTCAGAAACATCTT 23546
Query 10509 CTCAGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACAT--GTCAGTTAA 10566
|||| |||| || ||||| || || || || || ||| | || | || || | ||
Sbjct 23545 CTCAAATATCAAATGCAACTAATGGAATAGAGCCTCCTAGAGGATTTATTAGT-ATAAAA 23487
Query 10567 GCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAATACAAAGACCA 10626
||| || || ||||| || | |||||| | || || | ||| ||| || || | ||
Sbjct 23486 GCA-TCTAAAGATGGTATGCTTAAACAAGTTGTTCCCGAATAT--AAAAAACTAAAATCA 23430
Query 10627 A--TACGAGTTACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATC 10684
| || || ||| ||||| |||| || || | || || | |||| |||| ||
Sbjct 23429 AAGTATGAATTATTATGGGATATACCGGATAATATCGGATATCTTAAATTAGTTGGTATT 23370
Query 10685 ATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAGAAAACTAC 10744
||||| || ||||| ||||| | ||||| | || ||||| || || ||| ||| |
Sbjct 23369 ATGCAAAAATTTGTTGATCAATCAATTTCTACTAATACTAATTATGATCCATCAAAATTT 23310
Query 10745 CCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAGATTT 10785
||||| | || |||| || ||| ||| | |||||||
Sbjct 23309 CCAGATGGAAAAATTCCGATGAAATTATTACTAAAAGATTT 23269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330293571673118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |