Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq2065080 167 2e-36 >seq2065080 Length=53610 Score = 167 bits (184), Expect = 2e-36 Identities = 603/941 (64%), Gaps = 57/941 (6%) Strand=Plus/Minus Query 10935 AAACAAAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCC 10994 ||| |||||| || | || | || || ||||| || || ||| ||||||| | ||| Sbjct 23070 AAAAAAAAAATGATCCTTTGCAAGAACCAATGTTTTTTGGACAACCAGTTAATATTTCCA 23011 Query 10995 GTTACGACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCT 11054 | || || ||||| ||| || ||||||| ||| ||| | || ||||| || || | Sbjct 23010 GATATGATCAACAAAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTTCTTTTT 22951 Query 11055 TCTGGCGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACTACAGTAAAATGACTG 11114 | ||| | || |||||| | ||| | || |||| ||||| || | | || || | Sbjct 22950 TTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATTTGCCAA 22891 Query 11115 ATGCGGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACATTACTCGACTCGATCC 11174 | || |||||||| || | ||||| | || || ||||| ||||| || || || | Sbjct 22890 AACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATTCAATTC 22831 Query 11175 AAGGCCGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACTT 11234 |||| | || || ||||| || || ||||| |||| ||| |||| ||| | ||||| | Sbjct 22830 AAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATCAATACCTGAATTAGAAACAT 22771 Query 11235 GGGTAGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCATACACACACATCATTC 11294 || | ||||| ||| || ||||| || || ||||| || || || || || |||| Sbjct 22770 GGATTGAAACTTGGTCATTTTCTGAAACTATACATTCTCGATCTTATACTCATATAATTC 22711 Query 11295 GCAATATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATC- 11353 | || || ||| | ||| | | || || ||| || | ||||| || ||| Sbjct 22710 GAAACATAACAAATAATCCTTCATTAATATTTGAAGATATTATA---AATAACCA-ATCA 22655 Query 11354 ----CTAGAGCGAGCTAAAGATATTGCTCGTTACTACGACGATCTCATC----------- 11398 ||| | |||| ||||||||| || ||| ||||| ||| | || Sbjct 22654 ATATCTA-ATAGAGCAAAAGATATTTCTTTTTATTACGATGATTTTATTCAATATACAAG 22596 Query 11399 ---TTGGCATGCA--AAGAGCATGAGCTAAACGG---------CAAACACACAATGCGCG 11444 ||||||| | | ||| | || | ||| |||| | | ||| Sbjct 22595 TTATTGGCATTTATTAGGAGAAGGAATTCAACAAATTAATAATCAAAAAAA-AATTATTA 22537 Query 11445 ACCTAAAG---------AAAAAGTTGTACTTGTGCATGATGGCTGTTAATGTATTAGAAG 11495 | |||| ||||| || || | || | ||| || |||| ||||||| Sbjct 22536 ATTTAAATTGTTTGAAAAAAAAATTATATCTCTGTTTAATGAGCGTAAATGCTTTAGAAG 22477 Query 11496 CAGTTCGTTTCTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCGAGATTATGG 11555 | || | || || || ||||| ||||| |||||||| || |||||| | || ||||||| Sbjct 22476 CTATTAGATTTTATGTCAGTTTTGCTTGCTCATTTGCTTTTGCTGAAAGAGAAATTATGG 22417 Query 11556 AAGGTAATGCTAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACCAAAGCGGTA 11615 |||| ||||| |||||||| | || || | ||||||||| |||| || ||| Sbjct 22416 AAGGAAATGCAAAAATCATTCGATTAATAGCAAGAGATGAAGCATTACATTTAACTAGTA 22357 Query 11616 CACAGCACATGCTGAAGATGT---GGAACAACGGCACCGATGATATGGAAATGGCTTCTA 11672 | || || || | || || | ||||| | | |||| | | |||||| || Sbjct 22356 CTCAACATATAATTAATATTTTACAAAACAAAGAAAATAATGAAA---ATATGGCTAATA 22300 Query 11673 TCGCACATGAGTGTCGCGAAGAGTCAA---TCGAAATATTCAAGATGGCCGAAGAACAAG 11729 | | | || | || |||| || | |||| || | || | ||||||| Sbjct 22299 TTACTAAAGAAT---GCAAAGATGAAAGTTTTAAAATTTTTTTAAACGCTGCTGAACAAG 22243 Query 11730 AGAAAGACTGGGCAAACTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAGATA 11789 ||||| | ||||| | ||| |||| |||||| |||| | ||| |||| ||||| | Sbjct 22242 AGAAAAAATGGGCTGAATATTTATTTTCTGATGGTTCTATGCTAGGATTAAATAAAGAAA 22183 Query 11790 TTCTATGTGAATATGTTGAGTACATCACAAGCCACCGAATG 11830 || ||||| ||||| |||| || || |||| | | ||||| Sbjct 22182 TTTTATGTCAATATATTGAATATATTACAAACATCAGAATG 22142 Score = 161 bits (178), Expect = 7e-35 Identities = 1008/1601 (63%), Gaps = 26/1601 (2%) Strand=Plus/Minus Query 9198 GACTACAATACATCAAAGAATTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCCGA 9257 || || | || || ||| |||| ||||| || || ||| ||| || || || | Sbjct 24856 GATTAGATTATATTAAAAAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAA 24797 Query 9258 CACCAATCATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCG 9317 |||| || ||| | ||||| | || || || | ||||| ||||| || || ||| | Sbjct 24796 CACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTG 24737 Query 9318 AAAGCGGTGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTT 9377 || | | ||||| || | || || ||||||||| | | |||| || | || || | Sbjct 24736 AATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTAT 24677 Query 9378 CACAGCGTGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTC 9437 | || | ||||| ||||| ||||| | || | || || || | || | ||| Sbjct 24676 CTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTA 24617 Query 9438 GTGGTGGTGAAGCGGTACATACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAG 9497 | || || ||||| | |||||||||||||| || ||||||||||| || ||||| || | Sbjct 24616 GAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTG 24557 Query 9498 TGAAATGTTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGT 9557 | |||| || ||||| || ||| | || || || || || | || || || || | Sbjct 24556 TTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTT 24497 Query 9558 GGCACCTAG-AGTACA-AATCACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAA 9615 |||| ||| |||| | ||| | | || | || || || | || || ||||| || Sbjct 24496 GGCATTTAGAAGTAGAGAAT--TTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAA 24439 Query 9616 CCGTGTACGTCATATGGACTACGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCT 9675 || ||| | ||| | || |||| | ||||||||||| | | ||| | | || | Sbjct 24438 TCGAGTAAGACATGTAGATTACGCTATACAAATTAATAAATTATTATATCAAAGAATGTT 24379 Query 9676 GTCTGGTCAGAACATCACTTTATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATA 9735 ||| | | || || | |||||| ||| | ||| || |||| || | Sbjct 24378 ATCTAGAAAAAAAATTAGTTTATTTAGTCCTTCTGATGTTCCTTTATTATATGAAAGTTT 24319 Query 9736 CTTCGAAGACCAAGATAAGTTCGAGCGACTGTACACCAAAGCGGAATCTGATCCATCAAT 9795 || |||||| || || || ||| || ||| ||| ||| | ||| Sbjct 24318 TTTTTCTGACCAAATAAAATTTGAAGAACTATATGTAAAATATGAAAAAGATAAAAAAAT 24259 Query 9796 CGAAAAAGACACAATCTCTGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTC 9855 ||||| | ||| | | || ||| || | ||||||||| | |||| Sbjct 24258 TAAAAAAAAAGAAATTAAGTCCATAGATTTATTTTCTTTATTGATGCAAGAGAGAACTTC 24199 Query 9856 TACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTCGATGA 9915 |||||| | ||||| || || | |||||||| ||||| | | | || |||| ||| Sbjct 24198 TACAGGAAGAATCTATATACAAAATGTAGATCATTGTAATACTCATAGTTCTTTTGATCC 24139 Query 9916 GCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCAAACC 9975 | || || | | ||||| || ||||| ||||||| | |||| || ||||| Sbjct 24138 AAAAATAGCTCCTATCAGACAATCTAATTTATGTCTGGAAATAACTTTACCTACTAAACC 24079 Query 9976 GTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAA 10035 || ||| | ||| |||| ||| | || |||||||||||||||| || || Sbjct 24078 ATTATCTAATATTTTAGATAAAAATGGAGAAATAGCATTATGTACTCTATCTGCTTTAAA 24019 Query 10036 CTTGGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTCGTATCGTTGTGCGTGC 10095 || || || || || || || || || | ||| | | |||| ||||| Sbjct 24018 TTTAGGAAAAATAAAAAATATTAAAGAATTAGATGAATTATCTAATTTAATTGTACGTGC 23959 Query 10096 ATTGGATAATCTGTTAGACTACCAAAACTACCC---ATTACCTGCCGCAGAACGTTCGA- 10151 | ||| | ||||||| || ||| | || || | || ||| || || || Sbjct 23958 CCTTGATGCTTTGTTAGATTATCAAGAATATCCTATAATAAGTGC----TAAAATTGGAG 23903 Query 10152 CAATGCGCAGACGTAGC-CTTGGTGTAGGTATTATCAATTACGCCCACTGGGTGGCTAAG 10210 |||| | ||| | ||| | || ||||| ||| || | || | | | || || Sbjct 23902 CAATAGGAAGAAG-AGCTATCGGAGTAGGAGTTACGAACTTTGCTTATTATCTTGCAAAA 23844 Query 10211 AATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGAGCTGATTGAAGCT 10270 ||| | ||||| ||| || || || || || || ||| | |||||||| Sbjct 23843 AATAATGTTAAATATTCTGATGGAAGTGCTAATAAATTAACACATCAAACATTTGAAGCT 23784 Query 10271 ATGCAGTTCTACTTGCTACAAGCATCAATGGAA-CTGGCTAAAGAGAAGGGTATGTGTTC 10329 || || | || || || | ||||| || || || || ||||| || || | ||||| Sbjct 23783 ATACAATATTATTTATTAAACGCATC-TTGTAATCTAGCAAAAGAAAAAGGAACTTGTTC 23725 Query 10330 TGGATTCGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGATCGTTATAAGTCTGA 10389 | || | | || |||||| | |||| | | ||| ||||| |||||| ||| Sbjct 23724 TTTATATAATCAAACAAAGTATTCGTTAGGTTTACTACCAATTGATACTTATAAAAGTGA 23665 Query 10390 TGTCGACAACACCCACACAGCAGAACTACAGATGAATTGGAATTGGTTGCGTAATGAGAT 10449 | || | || | | | | | || | || ||| | | || | || | | Sbjct 23664 AATTGATATCATATGCGACGAACCATTGCATTTAAACTGGGAATTTTTAAG-AAAAAAAA 23606 Query 10450 TGTCCATA-ATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTT 10508 | || | | |||| || | |||||||| |||||||| | |||||||| |||||||||| Sbjct 23605 TATCAAAATATGGTTTAAGAAACTCTACACTATCTGCTATTATGCCTTCAGAAACATCTT 23546 Query 10509 CTCAGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACAT--GTCAGTTAA 10566 |||| |||| || ||||| || || || || || ||| | || | || || | || Sbjct 23545 CTCAAATATCAAATGCAACTAATGGAATAGAGCCTCCTAGAGGATTTATTAGT-ATAAAA 23487 Query 10567 GCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAATACAAAGACCA 10626 ||| || || ||||| || | |||||| | || || | ||| ||| || || | || Sbjct 23486 GCA-TCTAAAGATGGTATGCTTAAACAAGTTGTTCCCGAATAT--AAAAAACTAAAATCA 23430 Query 10627 A--TACGAGTTACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATC 10684 | || || ||| ||||| |||| || || | || || | |||| |||| || Sbjct 23429 AAGTATGAATTATTATGGGATATACCGGATAATATCGGATATCTTAAATTAGTTGGTATT 23370 Query 10685 ATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAGAAAACTAC 10744 ||||| || ||||| ||||| | ||||| | || ||||| || || ||| ||| | Sbjct 23369 ATGCAAAAATTTGTTGATCAATCAATTTCTACTAATACTAATTATGATCCATCAAAATTT 23310 Query 10745 CCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAGATTT 10785 ||||| | || |||| || ||| ||| | ||||||| Sbjct 23309 CCAGATGGAAAAATTCCGATGAAATTATTACTAAAAGATTT 23269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330293571673118