Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_021344.2
Length=176227
Score E
Sequences producing significant alignments: (Bits) Value
seq2065080 134 1e-26
>seq2065080
Length=53610
Score = 134 bits (148), Expect = 1e-26
Identities = 241/352 (68%), Gaps = 0/352 (0%)
Strand=Plus/Minus
Query 41652 TACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAG 41711
|||| || || |||||||| ||||| | |||||||| | || ||| | ||| ||
Sbjct 24802 TACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTT 24743
Query 41712 TGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGT 41771
| ||||||| | |||| | | |||| | ||||| | | | | || || || |
Sbjct 24742 TAATTGAATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAAT 24683
Query 41772 ATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTA 41831
|| | || ||| | || || || || | || | || || ||||| || | || |
Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTC 24623
Query 41832 AAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGA 41891
|| | || || |||||| ||||||| || || || |||| |||||| |||| |
Sbjct 24622 CTATTAGAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAA 24563
Query 41892 CAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATC 41951
| || ||||||||||| || |||||||| ||| | || |||||||| || ||| |||||
Sbjct 24562 CTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATC 24503
Query 41952 CGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGG 42003
| || |||||||| ||||| || || || | ||| | ||||| || | |||
Sbjct 24502 CTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGG 24451
Score = 91.5 bits (100), Expect = 2e-13
Identities = 203/302 (67%), Gaps = 2/302 (1%)
Strand=Plus/Minus
Query 43395 TTGCCCGATATGAAGAACAAAAACACAGTGTATTTGAAAAGCTGACTGAAAAACAACTGT 43454
|| || ||||||| |||||||| | | | |||||||| | | ||||||||||| |
Sbjct 23016 TTTCCAGATATGATCAACAAAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTT 22957
Query 43455 CATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATTGACCGTATGCAGTATGCGAAAA 43514
| || || ||| |||| |||||| | ||| | || | || || || | | | ||
Sbjct 22956 CTTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATT 22897
Query 43515 TGCCGGAACATGAAAAAATCATTTTCGATTCTAACCTGCAATATCAAACCCTACTGGATA 43574
|||| ||||||||||| |||||| ||| | ||||||||||| |||| |||
Sbjct 22896 TGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATT 22837
Query 43575 CCATTCAGGGACGCGGCCCTAACCTTGCATTTCTCCCGATTGCCTCTGATGTATCAA-TG 43633
| ||||| ||| | | || || | || ||| | || ||| || || | || |
Sbjct 22836 CAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATC-AATACCTGAATTA 22778
Query 43634 GAAACGTGGATCGAAACATGGGCGTTCAGTGAAACAATTCACAGTCGCAGTTATACGCAC 43693
||||| ||||| ||||| ||| | || |||||| || || ||| |||||| ||
Sbjct 22777 GAAACATGGATTGAAACTTGGTCATTTTCTGAAACTATACATTCTCGATCTTATACTCAT 22718
Query 43694 AT 43695
||
Sbjct 22717 AT 22716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542421123871440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |