Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq2065080 134 1e-26 >seq2065080 Length=53610 Score = 134 bits (148), Expect = 1e-26 Identities = 241/352 (68%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 41652 TACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAG 41711 |||| || || |||||||| ||||| | |||||||| | || ||| | ||| || Sbjct 24802 TACCAACACCGATTATGGCAGGTGTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTT 24743 Query 41712 TGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGT 41771 | ||||||| | |||| | | |||| | ||||| | | | | || || || | Sbjct 24742 TAATTGAATGTGCTGATAATTTAGATTCTATTAATGCAACAGCTAGTTCAATAGTAAAAT 24683 Query 41772 ATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTA 41831 || | || ||| | || || || || | || | || || ||||| || | || | Sbjct 24682 ATGTATCTCAAAGAGCAGGAATTGGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTC 24623 Query 41832 AAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGA 41891 || | || || |||||| ||||||| || || || |||| |||||| |||| | Sbjct 24622 CTATTAGAGGAGGGGAAGCATTTCATACTGGTTGTATACCTTTCTACAAACATTTTCAAA 24563 Query 41892 CAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATC 41951 | || ||||||||||| || |||||||| ||| | || |||||||| || ||| ||||| Sbjct 24562 CTGCTGTTAAATCCTGCTCTCAAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATC 24503 Query 41952 CGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGG 42003 | || |||||||| ||||| || || || | ||| | ||||| || | ||| Sbjct 24502 CTATTTGGCATTTAGAAGTAGAGAATTTGTTAGTTTTAAAAAATAATAGAGG 24451 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/302 (67%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 43395 TTGCCCGATATGAAGAACAAAAACACAGTGTATTTGAAAAGCTGACTGAAAAACAACTGT 43454 || || ||||||| |||||||| | | | |||||||| | | ||||||||||| | Sbjct 23016 TTTCCAGATATGATCAACAAAAATATATAATTTTTGAAAAATTAATAGAAAAACAACTTT 22957 Query 43455 CATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATTGACCGTATGCAGTATGCGAAAA 43514 | || || ||| |||| |||||| | ||| | || | || || || | | | || Sbjct 22956 CTTTTTTTTGGAGACCTGAAGAAATAGATTTATCTAAAGATCGAATAGATTTTAACAATT 22897 Query 43515 TGCCGGAACATGAAAAAATCATTTTCGATTCTAACCTGCAATATCAAACCCTACTGGATA 43574 |||| ||||||||||| |||||| ||| | ||||||||||| |||| ||| Sbjct 22896 TGCCAAAACATGAAAAACACATTTTTTTAAGTAATTTAAAATATCAAACCTTACTAGATT 22837 Query 43575 CCATTCAGGGACGCGGCCCTAACCTTGCATTTCTCCCGATTGCCTCTGATGTATCAA-TG 43633 | ||||| ||| | | || || | || ||| | || ||| || || | || | Sbjct 22836 CAATTCAAGGAAGAAGTCCAAATATAGCTTTTTTGCCTGTTGTATC-AATACCTGAATTA 22778 Query 43634 GAAACGTGGATCGAAACATGGGCGTTCAGTGAAACAATTCACAGTCGCAGTTATACGCAC 43693 ||||| ||||| ||||| ||| | || |||||| || || ||| |||||| || Sbjct 22777 GAAACATGGATTGAAACTTGGTCATTTTCTGAAACTATACATTCTCGATCTTATACTCAT 22718 Query 43694 AT 43695 || Sbjct 22717 AT 22716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542421123871440