Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq2065080 132 7e-26 >seq2065080 Length=53610 Score = 132 bits (146), Expect = 7e-26 Identities = 274/406 (67%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 63645 AACTTTTACAACGCTGTATCAAATCAGAAACTTTCTTTACCAACCCCGATCATGGCAGGT 63704 || ||||| ||||| | || | | | | | ||| ||||||| ||||| ||||||||| Sbjct 24839 AAATTTTATGACGCTATTTCTACTTTTAGAATATCTCTACCAACACCGATTATGGCAGGT 24780 Query 63705 GTTCGTACGCCAACTCGACAATTTAGCTCATGTGTTAAAATCGAATCTGGCGACTCTCTG 63764 || | || || ||| | ||||||||||| |||||| ||| |||| || || | | Sbjct 24779 GTAAGAACTCCTACTAGGCAATTTAGCTCTTGTGTTTTAATTGAATGTGCTGATAATTTA 24720 Query 63765 CATTCAGTCAACAAAGTAGCCGAAGCAATCATCAACTATATCAGTAAACGTGCTGGTATC 63824 |||| | || | ||| |||| | || ||| | | || | || || || Sbjct 24719 GATTCTATTAATGCAACAGCTAGTTCAATAGTAAAATATGTATCTCAAAGAGCAGGAATT 24660 Query 63825 GGTGTTAATGGCGGTGCTATTCGTGCTGAAGGCTCGGTTGTTCGAGCAGGTGAA--ATTC 63882 || |||||| || |||||||||| || | || ||| ||| ||| ||| Sbjct 24659 GGAATTAATGTAGGGCAAATTCGTGCTGTCGGAAGTCCTATTAGAGGAGGGGAAGCATTT 24600 Query 63883 GACACACTGGTGTAATCCCATTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCAC 63942 || |||||| || || |||| ||||| ||||| |||||||| || || || || | Sbjct 24599 --CATACTGGTTGTATACCTTTCTACAAACATTTTCAAACTGCTGTTAAATCCTGCTCTC 24542 Query 63943 AAGGTGGTGTTCGTGGTGGTGCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTG 64002 ||||||| ||| | || |||||||| || || ||| || ||||||||||||||||| | Sbjct 24541 AAGGTGGAGTTAGAGGAGGTGCTGCTACTCTGTTTTATCCTATTTGGCATTTAGAAGTAG 24482 Query 64003 AAAAACTTTTGGTGCTGAAGAACAACAAAGGCGTTGAAGAAAACCG 64048 | || | || || | || || || | ||| | ||||| || || Sbjct 24481 AGAATTTGTTAGTTTTAAAAAATAATAGAGGAATAGAAGATAATCG 24436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761880830853520