Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1891445 123 3e-22 seq251567 120 4e-21 seq2446941 87.8 2e-11 >seq1891445 Length=18558 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | || || |||||||||||||| || || || || Sbjct 7354 GCTTGGCCAATTCACCGGGCAACAGGAGACGGACGGCGGTCTGGATTTCCCGGCTGGTGA 7295 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||||| || |||| | ||||||| |||| | Sbjct 7294 TGGTGGAACGCTTGTTGTAGTGGGCCAAACGGCTGGATTCGGCGGCGATGCGCTCGAAAA 7235 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | ||| ||||| ||| |||||||| Sbjct 7234 TGTCGTTGACGAAACTGTTCATGATGCTCATGGCCTTTGAGGAGACGCCGGTGTCGGGGT 7175 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || | ||| ||||||||| Sbjct 7174 GTACTTGTTTCAACACTTTGTAGATG 7149 >seq251567 Length=509 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | || || |||||||||||||| || || || || Sbjct 470 GCTTGGCCAATTCTCCGGGCAACAAGAGACGGACGGCGGTCTGGATTTCCCGACTGGTGA 411 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||| |||| ||||| || |||| | ||||||| |||| | Sbjct 410 TGGTGGAACGCTTGTTGTAGTGGGCCAAACGGCTGGATTCGGCGGCGATGCGTTCGAAAA 351 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | ||| ||||| || ||| |||| Sbjct 350 TGTCGTTGACGAAACTGTTCATGATGCTCATGGCCTTCGAGGAGACACCGGTGTCAGGGT 291 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || || | ||| ||||||||| Sbjct 290 GCACTTGTTTCAACACTTTGTAGATG 265 >seq2446941 Length=32791 Score = 87.8 bits (96), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||| |||||||| || ||||||| ||||| | |||| |||||||||| | || ||| Sbjct 727 ATGTCATTGACAAAAGAATTCATGATGGACATGGCCTTGCTGGAGATGCCGATTTCAGGG 786 Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544 || |||||||| ||||||||||| Sbjct 787 TGAACCTGCTTCAGCACCTTGTA 809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5858210591633074