Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1891445 123 3e-22
seq251567 120 4e-21
seq2446941 87.8 2e-11
>seq1891445
Length=18558
Score = 123 bits (136), Expect = 3e-22
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| ||| ||| ||| | || || |||||||||||||| || || || ||
Sbjct 7354 GCTTGGCCAATTCACCGGGCAACAGGAGACGGACGGCGGTCTGGATTTCCCGGCTGGTGA 7295
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||||| |||| |||| ||||| || |||| | ||||||| |||| |
Sbjct 7294 TGGTGGAACGCTTGTTGTAGTGGGCCAAACGGCTGGATTCGGCGGCGATGCGCTCGAAAA 7235
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||| ||| | ||| ||||| ||| ||||||||
Sbjct 7234 TGTCGTTGACGAAACTGTTCATGATGCTCATGGCCTTTGAGGAGACGCCGGTGTCGGGGT 7175
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || || | ||| |||||||||
Sbjct 7174 GTACTTGTTTCAACACTTTGTAGATG 7149
>seq251567
Length=509
Score = 120 bits (132), Expect = 4e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| ||| ||| ||| | || || |||||||||||||| || || || ||
Sbjct 470 GCTTGGCCAATTCTCCGGGCAACAAGAGACGGACGGCGGTCTGGATTTCCCGACTGGTGA 411
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||||| |||| |||| ||||| || |||| | ||||||| |||| |
Sbjct 410 TGGTGGAACGCTTGTTGTAGTGGGCCAAACGGCTGGATTCGGCGGCGATGCGTTCGAAAA 351
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||| ||| | ||| ||||| || ||| ||||
Sbjct 350 TGTCGTTGACGAAACTGTTCATGATGCTCATGGCCTTCGAGGAGACACCGGTGTCAGGGT 291
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||| || || | ||| |||||||||
Sbjct 290 GCACTTGTTTCAACACTTTGTAGATG 265
>seq2446941
Length=32791
Score = 87.8 bits (96), Expect = 2e-11
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
||||| |||||||| || ||||||| ||||| | |||| |||||||||| | || |||
Sbjct 727 ATGTCATTGACAAAAGAATTCATGATGGACATGGCCTTGCTGGAGATGCCGATTTCAGGG 786
Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544
|| |||||||| |||||||||||
Sbjct 787 TGAACCTGCTTCAGCACCTTGTA 809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5858210591633074
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |