Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12]
3,033,322 sequences; 24,633,077,211 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2990797 105 5e-18
seq2886078 105 5e-18
seq3012833 95.1 1e-14
seq2983257 93.3 3e-14
seq2019908 93.3 3e-14
seq1039624 93.3 3e-14
seq1000743 93.3 3e-14
seq2958171 89.7 4e-13
seq1884690 89.7 4e-13
seq1874763 89.7 4e-13
seq1835634 87.8 1e-12
seq2496529 84.2 2e-11
>seq2990797
Length=389299
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| |||||||| ||||| || || |||||||| || || | ||| ||| |
Sbjct 336582 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 336641
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | |||||| ||||||| ||||| ||||| | || |||||
Sbjct 336642 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 336701
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| ||||| ||||||||||||| |||| | || ||||||||
Sbjct 336702 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 336761
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
|| || || || ||||| | ||| | || || | ||||| || |||
Sbjct 336762 ATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 336809
>seq2886078
Length=74263
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| |||||||| ||||| || || |||||||| || || | ||| ||| |
Sbjct 36856 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 36915
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | |||||| ||||||| ||||| ||||| | || |||||
Sbjct 36916 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 36975
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| ||||| ||||||||||||| |||| | || ||||||||
Sbjct 36976 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 37035
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
|| || || || ||||| | ||| | || || | ||||| || |||
Sbjct 37036 ATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 37083
>seq3012833
Length=100759
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||| || || || || ||||| || ||||| | || |||
Sbjct 36757 ATGCAAATATTTGTAAAGACCTTGACTGGCAAGACAATTACACTAGAGGTTGAGAGCTCT 36816
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | ||||| |||||| ||||| ||||| | ||| |||||
Sbjct 36817 GATACGATTGATAATGTAAAGGCTAAGATTCAAGACAAGGAAGGAATTCCCCCTGATCAG 36876
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || |||| ||| || || ||||||||||||| |||| | || ||||||||
Sbjct 36877 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGAACCCTTGCTGATTACAAT 36936
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || ||||| || | ||| | || ||| | ||||| || ||
Sbjct 36937 ATTCAGAAGGAATCCACCCTCCACCTTGTCTTACGTCTGCGTGGTGG 36983
>seq2983257
Length=2679
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425
||||| |||||| | | || || ||||| ||||||| ||| ||||| ||| |||||
Sbjct 2116 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGCTGGTAAGCAGTTGGAG 2057
Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485
|||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| |
Sbjct 2056 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 1997
Query 110486 AGACTGCGAGGGGGAA 110501
| ||| |||| ||||
Sbjct 1996 CGTCTGAGAGGTGGAA 1981
>seq2019908
Length=144052
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || ||||||||||| | || ||||| || ||||| | ||| ||| || |
Sbjct 124721 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACGATTACTTTGGAAGTTGAGAGCTCA 124662
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | ||||| ||||| ||||| |||||| | ||| || ||
Sbjct 124661 -GACACCATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGACCA 124603
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || ||||| | ||| ||||| ||||||||||||| | || |||| ||||||||
Sbjct 124602 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTGGAGGATGGGCGGACCTTGGCTGATTACAA 124543
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || ||||| || ||||| | ||| | | ||| |||| ||
Sbjct 124542 TATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 124495
>seq1039624
Length=3010
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || ||||||||||| | || ||||| || ||||| | ||| ||| || |
Sbjct 1447 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACGATTACTTTGGAAGTTGAGAGCTCA 1388
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | ||||| ||||| ||||| |||||| | ||| || ||
Sbjct 1387 -GACACCATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGACCA 1329
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || ||||| | ||| ||||| ||||||||||||| | || |||| ||||||||
Sbjct 1328 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTGGAGGATGGGCGGACCTTGGCTGATTACAA 1269
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| || ||||| || ||||| | ||| | | ||| |||| ||
Sbjct 1268 TATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 1221
>seq1000743
Length=1186
Score = 93.3 bits (102), Expect = 3e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425
||||| |||||| | | || || ||||| ||||||| ||| ||||| ||| |||||
Sbjct 623 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGCTGGTAAGCAGTTGGAG 564
Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485
|||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| |
Sbjct 563 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 504
Query 110486 AGACTGCGAGGGGGAA 110501
| ||| |||| ||||
Sbjct 503 CGTCTGAGAGGTGGAA 488
>seq2958171
Length=11077
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || ||||||||||| | || ||||| || || || | ||| ||| || |
Sbjct 9933 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 9874
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | || || ||||| ||||| |||||| | || || ||
Sbjct 9873 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 9815
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || ||||||| || ||||| ||| ||||||||| | | ||| |||| ||||||||
Sbjct 9814 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 9755
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || ||||| || | ||| | ||| | | ||| |||| ||
Sbjct 9754 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 9707
>seq1884690
Length=23820
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || ||||||||||| | || ||||| || || || | ||| ||| || |
Sbjct 18282 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 18341
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | || || ||||| ||||| |||||| | || || ||
Sbjct 18342 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 18400
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || ||||||| || ||||| ||| ||||||||| | | ||| |||| ||||||||
Sbjct 18401 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 18460
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || ||||| || | ||| | ||| | | ||| |||| ||
Sbjct 18461 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 18508
>seq1874763
Length=7899
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331
||||| || ||||||||||| | || ||||| || || || | ||| ||| || |
Sbjct 2213 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 2272
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | || || ||||| ||||| |||||| | || || ||
Sbjct 2273 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 2331
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || ||||||| || ||||| ||| ||||||||| | | ||| |||| ||||||||
Sbjct 2332 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 2391
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || ||||| || | ||| | ||| | | ||| |||| ||
Sbjct 2392 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 2439
>seq1835634
Length=113921
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416
|||||| ||||| ||||| | || ||||||||||| || |||| || ||| |||
Sbjct 54403 AAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAAAGGCTCATTTTTGTGGGAAAA 54462
Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476
||| ||||||||| | |||| | || ||||| |||||||| || |||||||| | |||
Sbjct 54463 CAGTTGGAGGATGGCTGAACCTTCGCCGATTATAACATTCATAAGGAATCTACCCTTCAC 54522
Query 110477 ATGGTGTTAAGACTGC 110492
| || || | ||||
Sbjct 54523 CTTGTCTTGTGTCTGC 54538
>seq2496529
Length=4132
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGA-AACG-GAGC 110327
|| ||||| || ||||||||||| | || ||||| || || || |||| || ||||
Sbjct 3932 AAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACAATCACTCTCGAGGTCGAGAGC 3991
Query 110328 -CTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386
||||| || | | | | ||||| |||||| ||||| |||||| | |||
Sbjct 3992 TCTGAC---ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCT 4048
Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446
||||| ||| | || || | ||| || || ||||| || |||| | |||| | || |||
Sbjct 4049 GATCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACCCTTGCCGAT 4108
Query 110447 TACAACATTCAAAAAGAATCTAC 110469
||||| || ||||| ||||| ||
Sbjct 4109 TACAATATCCAAAAGGAATCCAC 4131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397579419123746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |