Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2990797 105 5e-18 seq2886078 105 5e-18 seq3012833 95.1 1e-14 seq2983257 93.3 3e-14 seq2019908 93.3 3e-14 seq1039624 93.3 3e-14 seq1000743 93.3 3e-14 seq2958171 89.7 4e-13 seq1884690 89.7 4e-13 seq1874763 89.7 4e-13 seq1835634 87.8 1e-12 seq2496529 84.2 2e-11 >seq2990797 Length=389299 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| ||||| || || |||||||| || || | ||| ||| | Sbjct 336582 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 336641 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||| ||||||| ||||| ||||| | || ||||| Sbjct 336642 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 336701 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| ||||| ||||||||||||| |||| | || |||||||| Sbjct 336702 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 336761 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 || || || || ||||| | ||| | || || | ||||| || ||| Sbjct 336762 ATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 336809 >seq2886078 Length=74263 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| ||||| || || |||||||| || || | ||| ||| | Sbjct 36856 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 36915 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||| ||||||| ||||| ||||| | || ||||| Sbjct 36916 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 36975 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| ||||| ||||||||||||| |||| | || |||||||| Sbjct 36976 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 37035 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 || || || || ||||| | ||| | || || | ||||| || ||| Sbjct 37036 ATCCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 37083 >seq3012833 Length=100759 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || || || || ||||| || ||||| | || ||| Sbjct 36757 ATGCAAATATTTGTAAAGACCTTGACTGGCAAGACAATTACACTAGAGGTTGAGAGCTCT 36816 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | ||||| |||||| ||||| ||||| | ||| ||||| Sbjct 36817 GATACGATTGATAATGTAAAGGCTAAGATTCAAGACAAGGAAGGAATTCCCCCTGATCAG 36876 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| || || ||||||||||||| |||| | || |||||||| Sbjct 36877 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGAACCCTTGCTGATTACAAT 36936 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || | ||| | || ||| | ||||| || || Sbjct 36937 ATTCAGAAGGAATCCACCCTCCACCTTGTCTTACGTCTGCGTGGTGG 36983 >seq2983257 Length=2679 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| |||||| | | || || ||||| ||||||| ||| ||||| ||| ||||| Sbjct 2116 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGCTGGTAAGCAGTTGGAG 2057 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| | Sbjct 2056 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 1997 Query 110486 AGACTGCGAGGGGGAA 110501 | ||| |||| |||| Sbjct 1996 CGTCTGAGAGGTGGAA 1981 >seq2019908 Length=144052 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || ||||| | ||| ||| || | Sbjct 124721 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACGATTACTTTGGAAGTTGAGAGCTCA 124662 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | ||||| ||||| ||||| |||||| | ||| || || Sbjct 124661 -GACACCATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGACCA 124603 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||| | ||| ||||| ||||||||||||| | || |||| |||||||| Sbjct 124602 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTGGAGGATGGGCGGACCTTGGCTGATTACAA 124543 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || ||||| | ||| | | ||| |||| || Sbjct 124542 TATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 124495 >seq1039624 Length=3010 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || ||||| | ||| ||| || | Sbjct 1447 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACGATTACTTTGGAAGTTGAGAGCTCA 1388 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | ||||| ||||| ||||| |||||| | ||| || || Sbjct 1387 -GACACCATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGACCA 1329 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||| | ||| ||||| ||||||||||||| | || |||| |||||||| Sbjct 1328 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTGGAGGATGGGCGGACCTTGGCTGATTACAA 1269 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || ||||| | ||| | | ||| |||| || Sbjct 1268 TATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 1221 >seq1000743 Length=1186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| |||||| | | || || ||||| ||||||| ||| ||||| ||| ||||| Sbjct 623 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGCTGGTAAGCAGTTGGAG 564 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| | Sbjct 563 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 504 Query 110486 AGACTGCGAGGGGGAA 110501 | ||| |||| |||| Sbjct 503 CGTCTGAGAGGTGGAA 488 >seq2958171 Length=11077 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || || || | ||| ||| || | Sbjct 9933 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 9874 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || ||||| ||||| |||||| | || || || Sbjct 9873 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 9815 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||||| || ||||| ||| ||||||||| | | ||| |||| |||||||| Sbjct 9814 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 9755 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || ||||| || | ||| | ||| | | ||| |||| || Sbjct 9754 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 9707 >seq1884690 Length=23820 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || || || | ||| ||| || | Sbjct 18282 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 18341 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || ||||| ||||| |||||| | || || || Sbjct 18342 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 18400 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||||| || ||||| ||| ||||||||| | | ||| |||| |||||||| Sbjct 18401 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 18460 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || ||||| || | ||| | ||| | | ||| |||| || Sbjct 18461 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 18508 >seq1874763 Length=7899 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || || || | ||| ||| || | Sbjct 2213 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATAACTTTGGAAGTTGAGAGCTCA 2272 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || ||||| ||||| |||||| | || || || Sbjct 2273 -GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 2331 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||||| || ||||| ||| ||||||||| | | ||| |||| |||||||| Sbjct 2332 GCAGAGGCTTATTTTCGCCGGTAAGCAGTTGGAGGATGGCCGGACATTGGCCGATTACAA 2391 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || ||||| || | ||| | ||| | | ||| |||| || Sbjct 2392 CATTCAGAAGGAATCGACCCTACACCTTGTGCTTCGTCTGAGAGGTGG 2439 >seq1835634 Length=113921 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| ||||| ||||| | || ||||||||||| || |||| || ||| ||| Sbjct 54403 AAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAAAGGCTCATTTTTGTGGGAAAA 54462 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476 ||| ||||||||| | |||| | || ||||| |||||||| || |||||||| | ||| Sbjct 54463 CAGTTGGAGGATGGCTGAACCTTCGCCGATTATAACATTCATAAGGAATCTACCCTTCAC 54522 Query 110477 ATGGTGTTAAGACTGC 110492 | || || | |||| Sbjct 54523 CTTGTCTTGTGTCTGC 54538 >seq2496529 Length=4132 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGA-AACG-GAGC 110327 || ||||| || ||||||||||| | || ||||| || || || |||| || |||| Sbjct 3932 AAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACAATCACTCTCGAGGTCGAGAGC 3991 Query 110328 -CTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 ||||| || | | | | ||||| |||||| ||||| |||||| | ||| Sbjct 3992 TCTGAC---ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCT 4048 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||| ||| | || || | ||| || || ||||| || |||| | |||| | || ||| Sbjct 4049 GATCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACCCTTGCCGAT 4108 Query 110447 TACAACATTCAAAAAGAATCTAC 110469 ||||| || ||||| ||||| || Sbjct 4109 TACAATATCCAAAAGGAATCCAC 4131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397579419123746