Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20glauca_20[genbank_20GCA_5F000411955.5_202016-01-12] 3,033,322 sequences; 24,633,077,211 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1891445 150 3e-30 seq251567 138 2e-26 seq2446941 100 4e-15 seq2840847 89.7 8e-12 >seq1891445 Length=18558 Score = 150 bits (166), Expect = 3e-30 Identities = 178/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| || || |||||||||| |||||| ||| ||| ||| Sbjct 7393 TGTACTTGGTCACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAATTCACCGGGCA 7334 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || |||||||||||||| || ||| || ||| ||| |||||||| | Sbjct 7333 ACAGGAGACGGACGGCGGTCTGGATTTCCCGGCTGGTGATGGTGGAACGCTTGTTGTAGT 7274 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| || |||| | ||||||| |||| ||||||||||| || ||||| Sbjct 7273 GGGCCAAACGGCTGGATTCGGCGGCGATGCGCTCGAAAATGTCGTTGACGAAACTGTTCA 7214 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || ||||| ||| ||||||||| || || || | ||| |||| Sbjct 7213 TGATGCTCATGGCCTTTGAGGAGACGCCGGTGTCGGGGTGTACTTGTTTCAACACTTTGT 7154 Query 1485710 A 1485710 | Sbjct 7153 A 7153 >seq251567 Length=509 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| || || ||| |||||| |||||| ||| ||| ||| Sbjct 509 TGTACTTGGTGACGGCTTTGGTGCCTTCGCTGACAGCGTGCTTGGCCAATTCTCCGGGCA 450 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || |||||||||||||| || || || ||| ||| |||||||| | Sbjct 449 ACAAGAGACGGACGGCGGTCTGGATTTCCCGACTGGTGATGGTGGAACGCTTGTTGTAGT 390 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| || |||| | ||||||| |||| ||||||||||| || ||||| Sbjct 389 GGGCCAAACGGCTGGATTCGGCGGCGATGCGTTCGAAAATGTCGTTGACGAAACTGTTCA 330 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || ||||| || ||| |||||||| || || | ||| |||| Sbjct 329 TGATGCTCATGGCCTTCGAGGAGACACCGGTGTCAGGGTGCACTTGTTTCAACACTTTGT 270 Query 1485710 A 1485710 | Sbjct 269 A 269 >seq2446941 Length=32791 Score = 100 bits (110), Expect = 4e-15 Identities = 173/245 (71%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 |||||||||||||| || ||||| |||||||| ||| |||| || || ||| | | || | Sbjct 574 TTGGTGACGGCCTTAGTGCCCTCGGAGACGGCATGCTTGGCGAGCTCACCGGGAA-GAAC 632 Query 1485535 AGGCGCA-CGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC 1485593 | || | | || ||||| | ||| | || || ||| | | |||| | ||| | Sbjct 633 AAGCTTAACAGCAGTCTGAACCTCCCTGGAAGAGAGCGTATCCCTCTTGCCATAGCGAGT 692 Query 1485594 CAGG--CGGCCGGCCTCGGTGCCGATGCGGTCG--ATCATGTCGTTGACAAACGAGTTCA 1485649 || || | | ||| ||||| | || | ||||| |||||||| || |||| Sbjct 693 GAGCTTCGAC--GACTC--TGCCGCCACTTTCTCAAAAATGTCATTGACAAAAGAATTCA 748 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| | ||| |||||||||| | || ||||| |||||||| |||||||||| Sbjct 749 TGATGGACATGGCCTTGCTGGAGATGCCGATTTCAGGGTGAACCTGCTTCAGCACCTTGT 808 Query 1485710 AAACA 1485714 | ||| Sbjct 809 ACACA 813 >seq2840847 Length=2077 Score = 89.7 bits (98), Expect = 8e-12 Identities = 171/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| |||||||| || |||||| |||| || || || | | Sbjct 1249 TGAACTTGGTCACAGCCTTGGTGCCCTCTGAAACAGCGTGCTTGGCAAGCTCCCCAGGAA 1190 Query 1485530 TGATCAGG-CGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG 1485588 || || | | || || ||||| ||||| || | | ||| ||| |||||| | Sbjct 1189 -GAGCAAGTCTTACAGCCGTCTGAATCTCCCGAGAGGTGATTGTGGGCTTCTTGTTGTAG 1131 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGT-GCC-GATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 || ||||| |||||| | ||| | | | || | || || |||| || |||| Sbjct 1130 CGGGCCAGCTTAGATGCCTCGCTCGCCAGTTTC--TCAAAAATATCATTGATGAAGGAGT 1073 Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706 ||||||| ||| | ||| | ||||| || | |||||| || ||||| ||||| |||| Sbjct 1072 TCATGATTCCCATGGCCTTGCTAGAGATACCAATGTCGGGATGAACCTGTTTGAGGACCT 1013 Query 1485707 TGTAAA 1485712 || ||| Sbjct 1012 TGAAAA 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7593578103878358